Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0505 ATGGCGGCATTATCGTTTTCATTGTCTTCTGTGGTAGAGGATGTGCTTCAACAGCATAGTACTCGCCTCACAGATATTGATTTGGAGTCAAGAAAAGCAGAAGAAGCTGCATTTAGAAGGTATGATGCAGCAGGGTGGCTGAGAAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGCAGAGCCATCTGAGGAAGAGTTTAGGCTTGGTCTGAGAAGTGGGATCATCCTCTGCAATGTTCTTAACAAGGTTCAACCTGGTGCTGTGCCCAAGGTTGTGGAGACACCTGTTGATTCTGCATTAATCCCTGATAAGGGACCATTATCAGCATTTCAGTATTTTGAAAATGTCAGGAACTTTTTGGTAGCCATCCAGGAAATTGGAATTCCTACCTTTGAGGCATCTGATCTTGAACAAGGAGGAAAATCAGCCAGGGTTGTGAACAGTGCATTGGCCCTTAAATCCTATAGTGAATGGAAACAGACTGGGGCTAATGGTGTATGGAAATTTGGTGGGACTATCAAACCAACAACCTCTACAAAAACTTTAGAGAGAAAAAACTCAGAGCCGTTTACTAATTCCTTGTCAAGGAACTCCTCCATCACTGAACAATCTCTAGCTGGTTTCAACTCAGATGTTGACTCTAATAAAATGTCTGGTTCTTATTCCTTGAGTATGCTTGTTCGTGCAATTCTATTAGATAAGAAGCCAGAAGAAGTTCCGTCGTTGGTTGAATCTGTTTTGAGTAAGGTTGTAGAGGAATTTGAGCATCGCATTGCAAGCCAATGTGAACAGACAAAAATAACTTCAAGAGCTGCTGCTTCTCAAAGCAATGGATCTATGTCGAAGTTTGTTATGGAAGATAACAAGGTGCAGAACAAGATTCCAATGGTAACAAAGAAAGAGGGATTCATCCATAAAAAACATGTTGCTGAAGAGGAGACACAAGGACAACTTCTGAGGAAGCAGATGCTCTTTGATCAACAGCAAAGAGATATTCATGAACTAAAGCATACAATTCACACCACAAAAGCTGGTATGCAGTTCATGCAAACGAAATTTCATGAGGAATTCTCCAATCTCGGCTTGCACATTCATGGCTTAGCTCATGCTGCTTCTGGATATCATAGAGTTCTTGAAGAAAACCGCAAACTATACAATCAAGTCCAGGATCTTAAAGGAAGCATTAGAGTGTACTGTCGAGTAAGACCCTTCTTATCTGGAAAACCAAATTTTGTGAACACAGTGGATAGTATAGAAGATGGAACTATCACAGTTAATATTCCTTCAAAGAATGGGAAAGGACGAAGATCCTTCAACTTCAACAAAATATTTGGACCATCTTCTGGCCAAGTGGAGGTCTTCTCTGATATGCAGCCACTGATTAGGTCTGTTCTTGATGGTTTTAACGTTTGCATTTTTGCTTATGGTCAAACAGGATCAGGAAAAACTTACACTATGACTGGGCCGAAAGAGATCACAGAGAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGTGATTTGTTTCTTACAGCAGATCAAAGAAAGGACACTTTTCGCTATGATGTGTCTGTTCAAATGATTGAGATTTACAATGAGCAAGTCAGAGATCTATTGGTTACTGATGGAACAAACAAAAGATATCCTTTTACCAAAATTCGTAGTAATTCAAATAAAGGGCTTAGCGTGCCAGATGCAAGCCTAGTCTCAGTATCATCAACAATTGATGTTATTGAACTAATGAACCTGGGGCAAAGGAACCGCACAGTTGGAGCAACAGCTATTAATGACCGTAGTAGCCGATCTCACACTTGCTTGACTGTTCATGTTCAAGGAAGAGACTTGACATCTGGAACTCTCCTACGTGGGTGCATGCATCTGGTGGACTTGGCAGGAAGCGAGAGGGTTGACAAATCTGAGGCCACAGGAGATAGACTAAAAGAGGCACAACACATTAACAAATCTCTTTCAGCTTTAGGTGATGTCATTGCTTCCCTTGCTCAGAAAAACCAACATGTTCCTTACAGAAATAGCAAACTGACTCAGTTGCTCCAAGATTCGCTCGGAGGACAGGCCAAGACTCTTATGTTTGTTCACATAAGTCCAGAGGCAGATTCTATTGGAGAAACAATTAGCACCTTAAAATTTGCAGAAAGAGTTGCTACAGTTGAACTTGGAGCTGCAAGAGTAAACAAGGATGGTGCTGATGTTAAAGAGCTCAAAGAACAGATTGCTAGCCTTAAGGCAGCATTGGCAAGAACAGAAATAGAACCAGACCATTCCTTATCTGCCAATTCTAGAAAATATAGGACGAAGAAGGCTAGTGAGCTATCACCTTATCATGCAACCCAGAGGGGTGAAGACATTGTTGGTGATCTTGGGTGCCGGCAACCAATGGTTGATCTTCACAGCAATAGCACATTGAGGCAAAAGTGCCAGAGCTTTGATTTTGACGAGATTTCGGCAAATTCACCATCCTGGTCCCCAGTTAAAAGTCCTGTACCAACCTACATGGAGGATGATAGAGAAACTGTATCAGGAGAATGGGTTGATAAGGTGATGGTAAACAAGCTAGATGTAAAAAAAACTGAGAGCATGTTAGAGTGTTGGGAAGAAGACAATGGACACTTATCTGATATATTTTATCAGAAATATCTCCAAGATTCTTCCGAAGTATACTCACAACAATCCTACAGTATGTTCCTGGCAGGCAACCAGTTTAATATTTCAGGGTCAGATAACATGGATAATCTTGATGCTGCAACCAGTGATTCCTCAGAACCTGACTTACTTTGGCAACTTAATCATTCCAAACTTACCACCTTAGCCAGTGAACATGGATCAAAGGCTAGAAAACCTGTCTCAAAGTCAGCAAAAAGCCCAGAGTTGAGCAAGAATGCTATAAATTCTTCTCTTGGTCCTTCACCTTCAAGGAAACAAACAAATGGTGTATTACATAGAACAGGAAAGCATCCAGCTCCACTTGACATGAAATGCAAGACTGGGAGTAGAAAATAA 3021 0.4105 MAALSFSLSSVVEDVLQQHSTRLTDIDLESRKAEEAAFRRYDAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVPKVVETPVDSALIPDKGPLSAFQYFENVRNFLVAIQEIGIPTFEASDLEQGGKSARVVNSALALKSYSEWKQTGANGVWKFGGTIKPTTSTKTLERKNSEPFTNSLSRNSSITEQSLAGFNSDVDSNKMSGSYSLSMLVRAILLDKKPEEVPSLVESVLSKVVEEFEHRIASQCEQTKITSRAAASQSNGSMSKFVMEDNKVQNKIPMVTKKEGFIHKKHVAEEETQGQLLRKQMLFDQQQRDIHELKHTIHTTKAGMQFMQTKFHEEFSNLGLHIHGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLSGKPNFVNTVDSIEDGTITVNIPSKNGKGRRSFNFNKIFGPSSGQVEVFSDMQPLIRSVLDGFNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFLTADQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGTNKRYPFTKIRSNSNKGLSVPDASLVSVSSTIDVIELMNLGQRNRTVGATAINDRSSRSHTCLTVHVQGRDLTSGTLLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEADSIGETISTLKFAERVATVELGAARVNKDGADVKELKEQIASLKAALARTEIEPDHSLSANSRKYRTKKASELSPYHATQRGEDIVGDLGCRQPMVDLHSNSTLRQKCQSFDFDEISANSPSWSPVKSPVPTYMEDDRETVSGEWVDKVMVNKLDVKKTESMLECWEEDNGHLSDIFYQKYLQDSSEVYSQQSYSMFLAGNQFNISGSDNMDNLDAATSDSSEPDLLWQLNHSKLTTLASEHGSKARKPVSKSAKSPELSKNAINSSLGPSPSRKQTNGVLHRTGKHPAPLDMKCKTGSRK 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0505 1006 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1003 - -
Lal13g0505 1006 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 758 IPR027417 -
Lal13g0505 1006 SMART ch_5 39 157 IPR001715 GO:0005515
Lal13g0505 1006 MobiDBLite consensus disorder prediction 944 1006 - -
Lal13g0505 1006 Coils Coil 731 758 - -
Lal13g0505 1006 Gene3D Kinesin motor domain 391 764 IPR036961 -
Lal13g0505 1006 SUPERFAMILY Calponin-homology domain, CH-domain 42 170 IPR036872 -
Lal13g0505 1006 Pfam Calponin homology (CH) domain 41 158 IPR001715 GO:0005515
Lal13g0505 1006 PRINTS Kinesin heavy chain signature 469 490 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0505 1006 PRINTS Kinesin heavy chain signature 594 611 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0505 1006 PRINTS Kinesin heavy chain signature 625 643 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0505 1006 PRINTS Kinesin heavy chain signature 674 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0505 1006 ProSiteProfiles Kinesin motor domain profile. 396 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0505 1006 MobiDBLite consensus disorder prediction 960 984 - -
Lal13g0505 1006 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Lal13g0505 1006 CDD KISc_C_terminal 394 726 - -
Lal13g0505 1006 MobiDBLite consensus disorder prediction 992 1006 - -
Lal13g0505 1006 Pfam Kinesin motor domain 420 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0505 1006 Gene3D - 23 190 IPR036872 -
Lal13g0505 1006 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 1003 - -
Lal13g0505 1006 SMART kinesin_4 394 732 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0505 Lal-Chr13 3261383 3267774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0505 384 724 Calmodulin-binding Proteins AT5G65930 41.329 8.19e-74 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0505 K10406 - gmx:100801279 1600.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0505 13 3261383 3267774 Lal13g0505 13 3261383 3267774 ECH
Lal13g0505 13 3261383 3267774 Lal24g0975 24 8377901 8381465 LSH