Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0469 ATGTTGGTAGCTGCAGGATGTGTTCCTCATGGATCTATGGCTGAAATGAAGAACCTGGCCATCCAAGTAATCACCGGTCGGTGGTTCATGGTGTTTGCCTCCTTCTTAATCATGTCAGCCGCCGGAGCCACCCTCATGTTTGGCCTCTACTCTAATGATATCAAAACCACCCTTGGCTATGACCAAACTACCCTCAACCTCCTCAGTTTCTTCAAGGACTTGGGTGCAAACATTGGTGTCCTCACAGGTCTTATCAACGAGGTCTCACCACCCTGGGTGATATTAGCCATGGGTTCAGTCCTCAATTTCTTTGGCTACTTTATGACATGGCTAGCTGTGACAGAAAAAATACAAAAACCTAAAGTGTGGCAAATGTGCCTTTACACCTGCATAGGTGCTAACTTTCAAACCTTTGCCAACACTGGTGCTCTTGTCACTTGTGTCAAGAACTTCCCACAAAGCCGTGGGGTTGTGTTAGGGATCCTCAAAGGCTATATTGGTCTCAGTGGAGCCATTATTTCACAACTCTACTTTGCTTTTTACTACAATGACACTAAGGCTTTGATTTTGTTCATTGGTTGGCTCCCCGCTGCTATATCCTTTGTTTTTCTTCCTACCATTCGATACATGAAGCCGGTTAAGCAGCCTAATGAACTCAGTGTTTTCTACAAGTTTTTGTATATTTCACTTGGCCTTGCTGGGTTTCTTCTTGTTATGATTATAGTACAAAAGAAGGTCCCTTTCACACAAAGTGAATATGGTGTAAGTGCTGCTGTGGTGCTTATCTTGCTCTTCCTCCCACTTGCTGTTGTTTTTGGTGAACAATACAAGATTCAACGGAGTCAAAAGCTTGTATTTATTGACCCCTCACCGGTGAATATAGTAACAACAGTAGGTGGGAATGGTATATCTAACACTCTTTCACTAGCACCAACATCTAATGATGCAAGAGTTGCCATTAAAACTGAAGAAACAAGATGGTGGCAAAATATTTTTAGTCCACCGGAGAGAGGTGAGGACTATACAATACTTCAAACCCTTTTCAGCATAGACTTGTTATTACTATTCATCACTACTATTTTTGGCGTTGGTGGCACTTTAACTACAATTGACAACTTGGGTCAGATTGGAACCTCACTTGGATACCCAAAAACCAGTATAAGCACTTTTGTGTCCCTAGTGAGCATTTGGAATTACCTAGGACGTGTCTTTTCTGGGTTTGTTTCTGAACATTTTCTAACAAAGTACAAGTTCCCTCGTCCTCTTATGCTCACTTTGACTCTCCTCTTATCATGTGTTGGTAACCTTTTGATAGCATTTAATGTCAAAGATGGTCTTTACGTGGCTTCAATAATTATTGGGTTTTGTTTTGGTGCACAATGGCCTTTACTTTTTGCCATTATATCTGAGCTTTTTGGACTTAAATACTATGCAACTTTGTACAACTTTGGAAGCGTAGCTAGTCCAATTGGAGTATATGTGCTTAATGTGAGAGTCACAGGCCATTTATATGACAAAGAGGCTATGAAGCAAATGGTAGCATTGGGGCTACAGAGAAAGCAAGGGCAGGAATTGAATTGTATTGGAGTCAATTGCTTCAAGCTATCATTCATTATTATCACAGCTGCAACTTTATTTGGTGCTATTGTATCTCTCATTTTGGTGGCTAGGACTAAGGAATTTTACAAAGGGGACATATACAAGAGATATAAGGAGCAGCCTGAAGGAGCTACGGCGGAGATGGCGGTGGTCCGTAACTGCGGCAAGAGAGGCCAAGAACCAAAAGTTGGGAGTAAAATTTAG 1803 0.416 MLVAAGCVPHGSMAEMKNLAIQVITGRWFMVFASFLIMSAAGATLMFGLYSNDIKTTLGYDQTTLNLLSFFKDLGANIGVLTGLINEVSPPWVILAMGSVLNFFGYFMTWLAVTEKIQKPKVWQMCLYTCIGANFQTFANTGALVTCVKNFPQSRGVVLGILKGYIGLSGAIISQLYFAFYYNDTKALILFIGWLPAAISFVFLPTIRYMKPVKQPNELSVFYKFLYISLGLAGFLLVMIIVQKKVPFTQSEYGVSAAVVLILLFLPLAVVFGEQYKIQRSQKLVFIDPSPVNIVTTVGGNGISNTLSLAPTSNDARVAIKTEETRWWQNIFSPPERGEDYTILQTLFSIDLLLLFITTIFGVGGTLTTIDNLGQIGTSLGYPKTSISTFVSLVSIWNYLGRVFSGFVSEHFLTKYKFPRPLMLTLTLLLSCVGNLLIAFNVKDGLYVASIIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPIGVYVLNVRVTGHLYDKEAMKQMVALGLQRKQGQELNCIGVNCFKLSFIIITAATLFGAIVSLILVARTKEFYKGDIYKRYKEQPEGATAEMAVVRNCGKRGQEPKVGSKI 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0469 600 Pfam Major Facilitator Superfamily 355 556 IPR011701 GO:0022857|GO:0055085
Lal13g0469 600 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 594 - -
Lal13g0469 600 PANTHER MFS TRANSPORTER 11 594 - -
Lal13g0469 600 Gene3D MFS general substrate transporter like domains 327 563 IPR036259 -
Lal13g0469 600 CDD MFS_Mch1p_like 26 548 - -
Lal13g0469 600 SUPERFAMILY MFS general substrate transporter 26 560 IPR036259 -
Lal13g0469 600 Pfam Nodulin-like 27 272 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0469 Lal-Chr13 3034144 3035946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0469 2 573 Nodulin-like Gene Family AT2G39210 69.231 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0469 - - gmx:100808975 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0469 13 3034144 3035946 Lal13g0469 13 3034144 3035946 ECH
Lal12g0472 12 3377072 3378871 Lal13g0469 13 3034144 3035946 LSH