Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0468 ATGGCGATTACTAAAGGCCCAGGTTCCATTGGTGTTCATGGATGGGGAGACATGAAGAGTCTCTCCGTCCAAGCCATCACCGGCCGGTGGTTTGTGGTGTTTGCCTCCTTCTTCATCATGGCAGCTGCCGGAGCCACCTACATGTTCGGCCTATACTCCCAAGATATAAAACACACTCTTGGCTATGATCAAAGTACCCTCAATCTCCTTAGTTTCTTCAAAGACTTTGGGAGCAATGTTGGAATCCTCTCTGGCCTTATTAATGAGATAACACCACCTTGGGTGGTGTTAGCAATTGGTGCTGTAATGAATTTTGTTGGTTACTTCATGATATGGCTTTCAGTGACTGAAAAAGTAGCAAAACCTCAAGTGTGGCTCATGTGTCTCTATATCTGCATAGGTGCAAATTCTCAATCTTTTGCCAACACTGGTTCACTTGTGACTTGTGTCAAGAACTTCCCTGAAAGCCGTGGTGCTGTGTTAGGAATTCTGAAAGGCTATGTTGGTCTTAGTGGTGCAATCATCACACAACTATACTCAGCTATTTACTATAATGACTCCAAAGGTTTGATTTTGTTCATTGGTTGGCTTCCTGCTGCTATATCCTTTGTTTTTCTTCGAACCATTCGGTACATAAAGCCGGTTAGGCAACCTAAAGAGGTGAAAGTTTTCTACAATTTTTTGTATATTTCGCTTGGCCTTGCTGGGTTTCTACTTGTTATGATTATAATACAAAAAGAAGTTCATTTCAGTCAGAGTGAGTTTGGTGTAAGTGCTGCTATTGTTGTTTTCTTACTCTTCCTCCCAGTTGCTGTTGTTTTTATTGAAGAATATAAGACCTGGCAGAGTAAAAAGTTTGCATTGGTTAATCCCTCACCAGTGAAAATAGTTACTGAAGAGGTCAAACCAGATGATGGTGCTAATCAAAGTTTTAAATCTAGATCAGCCACTGCAACTGATGCTATTGGTAAATCTGATTCAGAACCAAAAGTGAATGAAACAGTTTCCACCAAAGACACAAGATGGTGGGAAAATGTGTTTAGTCCACCAGATAGAGGTGATGACTATACAATTCTTCAAGCATTATTTAGCATAGACATGTTAATCTTATTCATGACTTGTATTTGTGGTGTTGGAGGCACTTTAACTGCAATTGATAATCTTGGTCAGATTGGAGCCTCACTTAAATACCCAAAGAGAAGCATAAGCACTTTTGTGTCACTAGTGAGCATTTGGAATTACCTAGGACGTGTTTTCTCTGGGTTTGTTTCTGAACATTTTCTAACAAAGTATAGATTTCCTCGTCCTCTTATGCTCACTTTCACTCTCCTCTTATCATGTGTTGGTCACCTTCTCATAGCTTTTGATGTGAAAGACGGTCTCTATGTGGCTTCAGTGATTATAGGTTTTTGTTTTGGTGCACAATGGCCATTACTTTTTGCCATAATATCTGAACTATTTGGACTTAAATACTATGCAACTTTGTACAACTTTGGTAGTGTAGCGAGTCCACTTGGGTTATATGTGCTTAATGTCAAGATCACTGGTCATTTGTATGACAAAGAAGCTAGGGAGCAATTGGCAGCATTGGGTATACAAAGAAAAGAAGGACATGAATTGAGTTGTGTTGGGGTCAATTGTTTCAAATTATCCTTCATTATCATCACAACTGCAACTCTATTTGGTGCCATTGTTTCACTCATTTTGGTTGCTAGGACAAGAAAGTTTTACAAAGGTGACATATACAAGAGGTTCAGGGAAGAGGTTAAAGTGGCAGAAGCTGAAATGGCAGAGACAGGGGAAGATGCCAAAGTTAAACAGCAACTGGTGCCAACTTAG 1839 0.3991 MAITKGPGSIGVHGWGDMKSLSVQAITGRWFVVFASFFIMAAAGATYMFGLYSQDIKHTLGYDQSTLNLLSFFKDFGSNVGILSGLINEITPPWVVLAIGAVMNFVGYFMIWLSVTEKVAKPQVWLMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYSAIYYNDSKGLILFIGWLPAAISFVFLRTIRYIKPVRQPKEVKVFYNFLYISLGLAGFLLVMIIIQKEVHFSQSEFGVSAAIVVFLLFLPVAVVFIEEYKTWQSKKFALVNPSPVKIVTEEVKPDDGANQSFKSRSATATDAIGKSDSEPKVNETVSTKDTRWWENVFSPPDRGDDYTILQALFSIDMLILFMTCICGVGGTLTAIDNLGQIGASLKYPKRSISTFVSLVSIWNYLGRVFSGFVSEHFLTKYRFPRPLMLTFTLLLSCVGHLLIAFDVKDGLYVASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVKITGHLYDKEAREQLAALGIQRKEGHELSCVGVNCFKLSFIIITTATLFGAIVSLILVARTRKFYKGDIYKRFREEVKVAEAEMAETGEDAKVKQQLVPT 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0468 612 MobiDBLite consensus disorder prediction 308 322 - -
Lal13g0468 612 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 606 - -
Lal13g0468 612 Coils Coil 582 602 - -
Lal13g0468 612 PANTHER MFS TRANSPORTER 12 606 - -
Lal13g0468 612 SUPERFAMILY MFS general substrate transporter 29 580 IPR036259 -
Lal13g0468 612 CDD MFS_Mch1p_like 28 563 - -
Lal13g0468 612 Pfam Nodulin-like 29 274 IPR010658 -
Lal13g0468 612 MobiDBLite consensus disorder prediction 304 331 - -
Lal13g0468 612 Gene3D MFS general substrate transporter like domains 361 578 IPR036259 -
Lal13g0468 612 Gene3D MFS general substrate transporter like domains 26 223 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0468 Lal-Chr13 3030143 3031981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0468 16 588 Nodulin-like Gene Family AT2G39210 69.983 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0468 - - gmx:100776865 954.896
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0472 12 3377072 3378871 Lal13g0468 13 3030143 3031981 ECH
Lal13g0468 13 3030143 3031981 Lal13g0468 13 3030143 3031981 ECH
Lal12g0471 12 3370397 3375025 Lal13g0468 13 3030143 3031981 LSH