Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0464 ATGGCTCATGATTCACGTCGCAATCATCACCGATCGTCTTCTCCCGATAACGTTGACAAATCATCCAAACGCCACAAGCACCGTCACCACTCACACCGCCACCATCACAGCAAAAAACGCGATGAAAAAATTGAAAACGATGTCGAAACAGTTGCGGTGGTTCCTTCTCCAATTCCCGATCCCTATAGCCACCTTACTCATGACGATGTAGAGGAGGGGGAGATTCTTGAAGAGGATGACGATGTTGCAAAAATGCACTCGGAATCTGATGCCGAACCTGATGAAATCGAGGTGATTGGAGATCGAGATTCTCGATCTGATAAGAAAAATCTGGGACTTTTGACTAAAAGTTCAAAAACTAGAAGTGAAGACATTGACAATGATAAGGTTATTAGTCATGAAGATAATGGTTCTCCTAATCGTTCAACCACTGGGCCTCGGGATGGGAAGGATGCCAGATCTAGATCAGATGGTGCAGGCAATGGTTATTTGGATTCTAAATCTTCCAAAGGGGAAAAGTGGCAGAACGGGGAATTTGGAAGTCTTAAAGGAAATGAGAAACTAAAAGATAACAACGATGATGAAGCAATTGGGGCTTATGGGGGGAAAGTCAATAACCGCATAAATTCGTCTTCAGAAAGTCGAGAAGAAAATTACAGAATGGCAGGAAATTCTCCTCATGATAGATACAGAAGTCGATCAAGATCAATTGATCATAATAGGGGAAGGTCTCGTTCTCAAAGTATATTAGATGAACATGCTCATTCTAAGAGAAGGCACTCCGGGGAACAAGATACTCATGATTATATCAACAGACATAAGACTGACTATGATGAAGAAAGAATGAAGCCATGCCGAAAGGAGCATCGTCATTGCAGTATAGATTTGATGGTAGATTGTAGAAGGGAACACATCACTAAATACCACACTAGGGAAGCCCGGGATAGGGATAGAAGTAGGGACATTGGTGTGATTAGAGATTTAGACAGGGAAAATAAAAGAGGTGAAAGAAGCAGGAATAGGGAGGTTGATTGGGTGCGTAGAACAGAGAAAGAACGTAGAAGTAGCAAGGAGAGAGATAGAAGGGATGTTGAAAAAGTTAAGATCAGGGAAAGGGAGAAGGCTAGGGATATGAGAGGAGAAAATGAAATAGATAGAAGCTCGGAGGCAGTGTATGGGAGGGACAGGAGAAGGGGAAGTGAGAGAGAGAGGACTGCGGATAGAACAGGGGGTGGTGAAAGAGATGATATAAATCGGGAACGGTATAACATTAAGGAGCGAGAGAGGCAATATAATAGATATAGGCACAGGAGTAGAGACAATGCCAATGGTAAGGATAAGGATCTGCATCATGAGGATGGTAATGATAATCGAGATAGATATAGAAAACATTCTAGACATGAAGAGACTGAATATCATCAGGAGAGAAAAAGAAATTCTGATCCTGTAGAGGATTTTAAATCTATGGGAAGTACCATGAAAGAGGATGAATGCAAACTAGAAAGAGGTGAGATTGAAGATGACATAGATGAGGATGCATTGCAATTACCAGAACAAGAAGAAGATCTCAACAGAGTTAAAGAGGAGAGTAAGAGGAGAAGAGAAGCCATAATGGAGAAATACAAGAAGCAGCATCAGCAAGTTGAACAAGTGATTGAAAATGAAGGGAAAGGTATCATTCCTCCTTATCTGTGTAGGAGCCATGTTATGTCCCCTACTCTTCATCATGGAAGAGGCATCGTCATTGGTCCCAAAACCATTCATATTTTAGCTCGAGATACGGAACCTATGGACATTACTGAAGCACTTGATGGTAAGAATGACGCTGATGATTCAGAAACGTCATTTGCTGTTGGGAAATCTCCTGAAAATTCGAAAGTTGCGTCTGAAAAAATATATGGTGCTCGGGGTCTTGGAGAGGGCACTCCAAAGAGCGAGAGATCGGATGACAAATTTTGTGATGATATATTTGGTGAGACACCAACTGGAGTTCGGAAATCTGGGAAAGGAGATGGTTTACTGATTGAGAAGGTTGGACTCAATGACAATTGGGACGATCCAGAGGGTTATTACAGCTATCGTTTTGGTGAAATACTCGATGGCCGATATGAAATCACCGCTGCACATGGGAAGGGTGTCTTTTCAACAGTTGTTCAAGCAAGGAATCTTAAAACTGGTAATGGAGAACCAGACGAAGTAGCTATAAAAATTATTCGCAATAATGACACCATGTACAAGGCTGGTATGGATGAGTCAACCATATTGAAGAAATTAGTAGGTGCAGATCCGGACGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTAATATGAATCTTCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAAGCGCTGTGAGAGCATATGCAAAACAACTGTTTATTGCACTGAAGCATCTCCGGAACTGTGGTGTTATCCATTGTGATATAAAGCCAGATAATATGTTGGTGAACAAGGCTAAAAATGTGTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAGAATGAAGTTACGCCATATCTTGTGAGTCGCTTTTATCGTGCCCCGGAAATAATACTTGGCTTGCTGTATGATCACCCATTGGATATCTGGTCTGTTGGTTGTTGTTTGTATGAACTTTATACAGGGAAAGTTCTTTTTCCAGGGCTTACAAACAATGACATGTTACGGCTTCACATGGAATTGAAGGGCCCTTTTCCGAAGAAAATGCTTCGCAAGGGTGCGTTTATTGGACAACATTTTGACCAGGACTTGAATTTTCTGGCTACAGAGGAGGATCCTGTAACACAAAAGACCATAAAGCGGATGATTCTCAACATAAAGCCAAAAGATATTGGAACAATCATCACTGGTTCCCCTGGGGAGGATCCAAAAATGTTAGCCAACTTCAAGGATCTTCTGGAGAAAATTTTTGTCTTGGATCCAGACAAGAGGTTGACAGTCTCACAAGCACTGAACCACCCATTCATCACTGGCAAGTGA 3066 0.4152 MAHDSRRNHHRSSSPDNVDKSSKRHKHRHHSHRHHHSKKRDEKIENDVETVAVVPSPIPDPYSHLTHDDVEEGEILEEDDDVAKMHSESDAEPDEIEVIGDRDSRSDKKNLGLLTKSSKTRSEDIDNDKVISHEDNGSPNRSTTGPRDGKDARSRSDGAGNGYLDSKSSKGEKWQNGEFGSLKGNEKLKDNNDDEAIGAYGGKVNNRINSSSESREENYRMAGNSPHDRYRSRSRSIDHNRGRSRSQSILDEHAHSKRRHSGEQDTHDYINRHKTDYDEERMKPCRKEHRHCSIDLMVDCRREHITKYHTREARDRDRSRDIGVIRDLDRENKRGERSRNREVDWVRRTEKERRSSKERDRRDVEKVKIREREKARDMRGENEIDRSSEAVYGRDRRRGSERERTADRTGGGERDDINRERYNIKERERQYNRYRHRSRDNANGKDKDLHHEDGNDNRDRYRKHSRHEETEYHQERKRNSDPVEDFKSMGSTMKEDECKLERGEIEDDIDEDALQLPEQEEDLNRVKEESKRRREAIMEKYKKQHQQVEQVIENEGKGIIPPYLCRSHVMSPTLHHGRGIVIGPKTIHILARDTEPMDITEALDGKNDADDSETSFAVGKSPENSKVASEKIYGARGLGEGTPKSERSDDKFCDDIFGETPTGVRKSGKGDGLLIEKVGLNDNWDDPEGYYSYRFGEILDGRYEITAAHGKGVFSTVVQARNLKTGNGEPDEVAIKIIRNNDTMYKAGMDESTILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLNMNLREVLKKFGRNIGLRLSAVRAYAKQLFIALKHLRNCGVIHCDIKPDNMLVNKAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLLYDHPLDIWSVGCCLYELYTGKVLFPGLTNNDMLRLHMELKGPFPKKMLRKGAFIGQHFDQDLNFLATEEDPVTQKTIKRMILNIKPKDIGTIITGSPGEDPKMLANFKDLLEKIFVLDPDKRLTVSQALNHPFITGK 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0464 1021 Gene3D Transferase(Phosphotransferase) domain 1 763 1019 - -
Lal13g0464 1021 MobiDBLite consensus disorder prediction 22 39 - -
Lal13g0464 1021 MobiDBLite consensus disorder prediction 204 219 - -
Lal13g0464 1021 MobiDBLite consensus disorder prediction 1 283 - -
Lal13g0464 1021 CDD STKc_PRP4 702 1018 IPR044092 GO:0004674|GO:0006468|GO:0045292
Lal13g0464 1021 SUPERFAMILY Protein kinase-like (PK-like) 690 1020 IPR011009 -
Lal13g0464 1021 MobiDBLite consensus disorder prediction 631 652 - -
Lal13g0464 1021 Gene3D Phosphorylase Kinase; domain 1 673 762 - -
Lal13g0464 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Lal13g0464 1021 MobiDBLite consensus disorder prediction 79 135 - -
Lal13g0464 1021 ProSiteProfiles Protein kinase domain profile. 703 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0464 1021 MobiDBLite consensus disorder prediction 220 283 - -
Lal13g0464 1021 Coils Coil 509 547 - -
Lal13g0464 1021 MobiDBLite consensus disorder prediction 604 623 - -
Lal13g0464 1021 PANTHER DUAL SPECIFICITY PROTEIN KINASE 334 1021 - -
Lal13g0464 1021 MobiDBLite consensus disorder prediction 1 21 - -
Lal13g0464 1021 SMART serkin_6 703 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0464 1021 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 334 1021 - -
Lal13g0464 1021 MobiDBLite consensus disorder prediction 331 494 - -
Lal13g0464 1021 Pfam Protein kinase domain 707 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0464 Lal-Chr13 2987953 2997825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0464 710 1019 MAP Kinase Gene Family AT4G01370 33.229 1.54e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lal13g0464 Pkinase 6.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0464 K08827 - gmx:100776908 1328.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0464 13 2987953 2997825 Lal24g0377 24 2722177 2732878 LSH