Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0456 ATGAAGGTTAGTTGCAATGGATGCCGCACTCTCCGCAAAGGTTGCAGTGATAACTGTGTCCTTAGACCTAGTCTTGAGTGGATCAATTCACCTGATTGTCAATCCAATGCAACCATGTTCCTCGCCAAATTCTACGGCCGCACAGCCTTGATCAACCTCATCTCCGCCGCTCCCGAATCCCTTCGTACAGATGTGTTCAAATCATTGCTGCATGAAGCTTGTGGGAGATTAATAAATCCAACCTATGGATCAATGGGTTTACTATGGAGTGGAGAATGGGCACGATGCGAAGCTGCTGTTGACGCTGTCTTGAATGGGTCAAGGATCCATGGTGTGGGAGCTTTTGATTGGCTCGCCACAGGAGCACATGTTGGTCGTGCTGAAAATGTTGTACAAGCATATGATATACGTCACGTGCCAAGAGTGAGGGACATAGATGAGATTGAAGATGGAAGGCGAGCCAAGAGACCCAGGAGAGCAATGAGACTCACACCACAAATGGGTGTGGTGGATTTGCATGAGAATGATAGCAATGAAACTGTGGAACAGCCTCTGAACCCTGAAACCGATCTCAACTTGGAACTCACTCTAGCCTTCCCTGGCTAG 606 0.4818 MKVSCNGCRTLRKGCSDNCVLRPSLEWINSPDCQSNATMFLAKFYGRTALINLISAAPESLRTDVFKSLLHEACGRLINPTYGSMGLLWSGEWARCEAAVDAVLNGSRIHGVGAFDWLATGAHVGRAENVVQAYDIRHVPRVRDIDEIEDGRRAKRPRRAMRLTPQMGVVDLHENDSNETVEQPLNPETDLNLELTLAFPG 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0456 201 Pfam Lateral organ boundaries (LOB) domain 4 101 IPR004883 -
Lal13g0456 201 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Lal13g0456 201 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 162 - -
Lal13g0456 201 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0456 Lal-Chr13 2920819 2921815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0456 1 199 AS2 family AT3G02550 42.326 2.57e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal13g0456 LOB 7.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0456 - - lang:109335701 366.311