Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0442 ATGGAGAACACATACCATACTAAAACCACATTCCCCACTTCCCCAACGCGCCTCAAGCTCTTCGGATTCAACGTACAAGAAGAAAGCCTCGAAGACGAGGTGCTCCATGAAGATTCAACAACTCCGAACACCACTTCAACTTCAACCTCAACCTCTTCTCCTTCCTCCTCCTCCGGTGAACGGAAATATGAGTGTCAGTACTGTTGCAGAGAGTTCTCAAATTCACAAGCACTTGGTGGTCACCAAAACGCTCACAAGAAAGAGCGTCAACAACTCAAGCGTGCCCAGTTACAAGCTTCCAGAAACGCCTTCATCCGGAACCCCATCATCTCCGCCTTCACCCCTCCGCCACACCTCCTCTCTCCGCCGCTGGGATCCGTAATGATCCCGGCAGGCACGCACTCTTGGGTTTACACGCCGCCACGTGCCACTCCTCCTCCCTTGCACGTGTCAGTACCACACGGTTGTGTCTTTCCGTCGGCGCACAGCAAAACCATGAGTAGCAGTAGTAATAATATTAATAATAGTAACAGTAATTGTAGTGGTTGTTGTAATAGTGTAAAATCTGCGGGTGTAGGGTTTTTCCCCTATGGTGGCGCTGTAGGTGATTCGTCATCCGTATTGTCAACGATGGGGTCGCAGGTGCAGGTTCAGGTACAAGCCCGGGCCCACCGTGGTAGAAATGAAGGGTCATCTTTGAGTAGGTTCTCAAAAGTTGCTGGTGGGTCCAATTTCAATGATGCATTAGGCTTGGACTTGCACCTTAGCCTTTCCCCTGCTGCACCGTGA 789 0.507 MENTYHTKTTFPTSPTRLKLFGFNVQEESLEDEVLHEDSTTPNTTSTSTSTSSPSSSSGERKYECQYCCREFSNSQALGGHQNAHKKERQQLKRAQLQASRNAFIRNPIISAFTPPPHLLSPPLGSVMIPAGTHSWVYTPPRATPPPLHVSVPHGCVFPSAHSKTMSSSSNNINNSNSNCSGCCNSVKSAGVGFFPYGGAVGDSSSVLSTMGSQVQVQVQARAHRGRNEGSSLSRFSKVAGGSNFNDALGLDLHLSLSPAAP 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0442 262 PANTHER ZINC FINGER PROTEIN 5 9 262 IPR044299 GO:0010090
Lal13g0442 262 PANTHER ZINC FINGER PROTEIN GIS3 9 262 - -
Lal13g0442 262 SUPERFAMILY beta-beta-alpha zinc fingers 59 90 IPR036236 -
Lal13g0442 262 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
Lal13g0442 262 Gene3D Classic Zinc Finger 39 108 - -
Lal13g0442 262 MobiDBLite consensus disorder prediction 39 60 - -
Lal13g0442 262 MobiDBLite consensus disorder prediction 30 60 - -
Lal13g0442 262 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 90 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0442 Lal-Chr13 2801316 2802104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0442 13 261 C2H2 Transcription Factor Family AT1G68360 41.971 1.79e-49 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0442 - - gmx:100811796 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0449 12 3163574 3164278 Lal13g0442 13 2801316 2802104 LSH