Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0438 ATGACTTCTGTTTATGTATTCCATTTCCTTTTGTTTTCACATCTTATGTTAACTCTCTTGGCTGCTGGAGTTGAAAATGGAAATGGAAATGGAAACATAGGAAAGTGTCCACCTTCATTTCAGTGTGGACATCTTGGCAATATCACATTCCCTTTCACAGTAACACAACACCCTCACTGTGGCTTATTTGTCATACACAATTGTGATAGTGTTGATCCTATGAAGCCCAAAATTATCCAACTAGAGAATAAAGGGAAAAGGTTTTGCATTATAAGTGTTCTTCACAATCCTCATATTCCTGCTACAACCACACTTCAAATCAGAGACAAACTTCTCTATGTTATGCTCCAATCAAGAAGTTGTGAATCCTTTAACCATAATTATACTCTCCCTCCTACCTTTCCTTTTGGTTCTATTCATATCCAATATAGTCAAGCCTTGTTCAAGTGCAACCGAACCCTTCATGTCAAGCCACCATTAGATGTGCATAATTATACAAATTGCATTGATTATGATCTCTATTACAAGCCTTTACTTTCTCCTAGTTATGATAAGTCTTTGAGTTCTTTGGCAGCATGTATAATGATCAATCTTCCTATTAAAGATGTGGCTGATGCTAAAGACCCCTTTACATTCATAACATCTGATATCATCATTGAAGTACAATTAACAGATAAATGTGCAAATTGCTACTATGTCAAAAGAGGGCAGTGTCATTTTGACAGAAGACAGAAATTCTGTTGCATCAATGCTAAAAAGAGTTGGAGTTTGAAATCAAAATTGGCTATAGGTTTAGGTGCAGGAATCCTAGGCATCTTCATAATTGGGTTGCCATTGATCCTTATACACTACAAACGGAAACGTGCTACTTCAGGCAAACACTTCCATACAAGAAATTCTTATGCTGGTTCCTCCACAAATCGACACCTAGAAAGCAGTGGTGTATACTTCGAAGTTCCAATCTTCTCCTACAAGGAACTTAAAGAAGCAACAAACAATTTTGACCATACTAAAGAACTCGGAGATGGAGGCTTCGGGACTGTATACCATGGGAAACTACATGATGGACGGGAAGTCGCTATCAAACGCTTATATGAGCACAATTATAGGCGAGTAGAGCAGTTCATGAATGAAGTTAAGATCCTCGCACGCTTGCGCCACACGAATCTAATGTCCCTCTATGGCTGCACTTCAAAGCACAGCCACGAACTACTACTTGTGTATGAATATATTTCAAATGGCACCGTTGCTTCCCATCTCCATGGTGAATTAGCCAAGCATGGTTTACTACCATGGTGTATAAGAATGAAAGTTGCAATAGAGACTGCAACTGCATTGGCATATCTCCATGCTTCTAATATCATTCACCGTGATGTGAAAACAAACAACATTCTCCTTACCGAAAATTTCTGTGTTAAAGTTGCTGATTTTGGCCTTTCAAGACTATTCCCTATAGATGTAACTCATGTCTCCACAGCTCCACAAGGGACCCCGGGTTACGTTGACCCGGAATATCACCAATGCTATAAGCTTACTAGTAAGAGTGATGTATATAGTTTTGGAGTTGTGCTCATTGAGCTAATATCTTCAAAGCCTGCTGTTGATATAAACAGGAGTAAGGAAGAGATTAACTTGTCCAATCTAGCCATAAAGAAGATTCAACATAGTGCAATTAGTGAGCTGGTAGATCCTTGTCTTGGTTTTGATTCAGATAATGAGGTGAAGAGGAATATAGTTTCTGTTGCAGAGTTGGCTTTTCAATGTTTGCAAATGGACAAGGAATTGAGACCTTCCATGGATGAAGTATTGAATGAACTAAGAAAAATTGAAAGTGGAATTGAAGAAGCAGAGGTTGGAGTTTCACATTGTAATGTACATACACCCACCTTATCTGAATGGGCTGAAGTTGGATTATTGAAGAATATGAATCAGCCTTGTTCACCAAACACTGTCACTGATATATGGGAAAGTAAATATACTACTCCTAATGTCAGTGCTTAA 2001 0.3833 MTSVYVFHFLLFSHLMLTLLAAGVENGNGNGNIGKCPPSFQCGHLGNITFPFTVTQHPHCGLFVIHNCDSVDPMKPKIIQLENKGKRFCIISVLHNPHIPATTTLQIRDKLLYVMLQSRSCESFNHNYTLPPTFPFGSIHIQYSQALFKCNRTLHVKPPLDVHNYTNCIDYDLYYKPLLSPSYDKSLSSLAACIMINLPIKDVADAKDPFTFITSDIIIEVQLTDKCANCYYVKRGQCHFDRRQKFCCINAKKSWSLKSKLAIGLGAGILGIFIIGLPLILIHYKRKRATSGKHFHTRNSYAGSSTNRHLESSGVYFEVPIFSYKELKEATNNFDHTKELGDGGFGTVYHGKLHDGREVAIKRLYEHNYRRVEQFMNEVKILARLRHTNLMSLYGCTSKHSHELLLVYEYISNGTVASHLHGELAKHGLLPWCIRMKVAIETATALAYLHASNIIHRDVKTNNILLTENFCVKVADFGLSRLFPIDVTHVSTAPQGTPGYVDPEYHQCYKLTSKSDVYSFGVVLIELISSKPAVDINRSKEEINLSNLAIKKIQHSAISELVDPCLGFDSDNEVKRNIVSVAELAFQCLQMDKELRPSMDEVLNELRKIESGIEEAEVGVSHCNVHTPTLSEWAEVGLLKNMNQPCSPNTVTDIWESKYTTPNVSA 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0438 666 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 32 665 IPR044652 -
Lal13g0438 666 Gene3D Transferase(Phosphotransferase) domain 1 411 619 - -
Lal13g0438 666 ProSiteProfiles Protein kinase domain profile. 334 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0438 666 SUPERFAMILY Protein kinase-like (PK-like) 315 610 IPR011009 -
Lal13g0438 666 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Lal13g0438 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Lal13g0438 666 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 32 665 - -
Lal13g0438 666 Gene3D Phosphorylase Kinase; domain 1 306 410 - -
Lal13g0438 666 Pfam Protein kinase domain 336 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0438 666 SMART serkin_6 334 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0438 Lal-Chr13 2773639 2777953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0438 40 666 Receptor kinase-like Gene Family AT1G25390 47.656 5.53e-177 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lal13g0438 Pkinase 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0438 - - gmx:100305407 769.229