Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0435 ATGTTCCCTTTACTTTCCTTGCTTCTTCTTCTTCTTCTTCTTTGCTCCACTTCTCTTCCACCTTTTGTAAATTCCCTCAATGCTGAAGTCTATGTCCTTTTAACACTTAAACAATCTATCACAGACCCACAAGGGTCTATGAGTAATTGGAATGATTCTGATCAAAACCCATGTTCATGGAATGGCATTACTTGCAAGGACCAGAGTGTTGTCTCCATTAGCATCCCAAAAAGGAAACTTTATGGCTCTCTTCCTTCTACTCTTGGATCCCTTTCCCAACTCCGCCATATCAATTTCAGGAACAACAAGCTCTTTGGAAATTTGCCTCCACAACTATTTCAAGCTCAGGGACTTCAAAGTTTGGTGCTTTATGGCAATTCCTTTTCTGGGTCTGTTCCAAATGAGATACACAACCTCAGGTACCTTCAAACTCTAGATTTGTCGCAAAACTTCTTTAATGGGTCATTGCCTGCTACTATTGTCCAATGCAAGAGACTCACAACCCTTGTTCTGAGTATAAACAATTTCACTGGCCGTTTGCCAGATGCATTTGGTACTGGTTTTCTATTTCTTCAAAAGCTAGACCTTTCTTTCAATCAGTTTAATGGTTCAATTCCTAGTGATATGGGAAATTTGTCAAGCTTGCAAGATACTGTTGATCTGTCTCATAATCATTTTAGTGGTTTAATCCCATCCACCCTTGGTAATCTACCTGAGAAGGTTTATATTGATCTTACTTACAATAATTTGTATGGTCCAATACCTCAAAATGGTGCTTTAATGAATAGAGGACCAACTGCTTTTATTGGCAATCCTGGTCTATGTGGCCCTCCTTTGAAGAATCCATGTGGCTCTGATACTCCGGGTGCCAATTCAACTTCCCCAATTCCATTTCTACCTGATAGTAATCCATCTCAGGATATTGGTAATAATGGTTATGGGAAAAGCAAAGGGTTAACTAAGGGTGCTGTGGTTGGCATTGTTGTGGGTGATATAATTGGAATTTGCCTTTTGGGTTTGCTGTTCTCTTTCTGCTACTCAAGGGTTTACGGTTTTAATCAGGATCAGGATGAGAATGTTGTTAATAAGGGAACGAAAGGAAGGATAGAGTGCTTCTGCTTCAGAAAGGATGAATCTGGGGCCTTATCTGATAATGTTGAGCAGTATGACATTGTCGCATTAGATAATCAAGTGGCCTTTGATTTGGATGAGCTTCTCAAAGCTTCGGCTTTTGTTATTGGTAAGAGTGGAATAGGGATTATGTACAAGGTGGTGCTTGAAGACGGGCTTGCCTTGGCTGTGAGAAGATTGGGTGAGGGAGGTTCACAAAGATTTAAAGAGTTTCAAACAGAAGTAGAAGCAATAGGGAAGTTAAGACATCCAAATATTGTGACTCTAAGAGCGTATTACTGGTCTGTTGATGAGAAGCTTCTCATATATGACTACATATCCAATGGAAACCTTGCTACAGCAATGCATGGTAATGCTGGACTTGCCACATCTACACCGCTATCTTGGTTGTTTCGATTAAAAATCATGAAAGGAACTGCGAAAGGGTTGGTCTATCTCCACGAGTTTAGCCCCAAAAAATATGTCCATGGAGACCTGAAGCCAAGTAACATACTCATTGGACATAGCATGGAACCCCACATTTCTGATTTTGGACTCGGGCGCCTTGCCATTATCGCTGGAGGGTCCCAAACCTTGGAATCCGACCACGCCGCTGCTGAGAAACCACAAGAAAGAAGACGAAACAGCATGTCCACAGAAGTTCCACCTAATGTTTTGGCAAGTGGTTATCAGGCTCCAGAGGCATTGAAGGTGGTGAAGCCATCACAGAAGTGGGACGTTTATTCATACGGTGTGATTTTGTTAGAAATGATCACAGGAAGATTACCAATTGTCCAAGTAGGTAGCTCAGAAATGGACCTTGTTCAGTGGATTGAGTTCTGCATTGAGGAAAAGAAGCCACTTTCAGATGTATTAGACCCTTATTTAGCTGAAGATGCAGATAAAGAAGATGAAATAATTGCAGTGTTGAAGATTGCAATGGCTTGTGTCCATAGCAGCCCTGAAAAGAGACCTACAATGAGGCATGTGCTTGATGCTTTGAATAGATTATGTATTTCCTCTGATTGA 2139 0.4114 MFPLLSLLLLLLLLCSTSLPPFVNSLNAEVYVLLTLKQSITDPQGSMSNWNDSDQNPCSWNGITCKDQSVVSISIPKRKLYGSLPSTLGSLSQLRHINFRNNKLFGNLPPQLFQAQGLQSLVLYGNSFSGSVPNEIHNLRYLQTLDLSQNFFNGSLPATIVQCKRLTTLVLSINNFTGRLPDAFGTGFLFLQKLDLSFNQFNGSIPSDMGNLSSLQDTVDLSHNHFSGLIPSTLGNLPEKVYIDLTYNNLYGPIPQNGALMNRGPTAFIGNPGLCGPPLKNPCGSDTPGANSTSPIPFLPDSNPSQDIGNNGYGKSKGLTKGAVVGIVVGDIIGICLLGLLFSFCYSRVYGFNQDQDENVVNKGTKGRIECFCFRKDESGALSDNVEQYDIVALDNQVAFDLDELLKASAFVIGKSGIGIMYKVVLEDGLALAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIVTLRAYYWSVDEKLLIYDYISNGNLATAMHGNAGLATSTPLSWLFRLKIMKGTAKGLVYLHEFSPKKYVHGDLKPSNILIGHSMEPHISDFGLGRLAIIAGGSQTLESDHAAAEKPQERRRNSMSTEVPPNVLASGYQAPEALKVVKPSQKWDVYSYGVILLEMITGRLPIVQVGSSEMDLVQWIEFCIEEKKPLSDVLDPYLAEDADKEDEIIAVLKIAMACVHSSPEKRPTMRHVLDALNRLCISSD 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0435 712 MobiDBLite consensus disorder prediction 571 592 - -
Lal13g0435 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Lal13g0435 712 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 7 711 - -
Lal13g0435 712 CDD STKc_IRAK 413 707 - -
Lal13g0435 712 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Lal13g0435 712 SUPERFAMILY Protein kinase-like (PK-like) 412 704 IPR011009 -
Lal13g0435 712 SMART serkin_6 411 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0435 712 Pfam Protein kinase domain 413 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0435 712 ProSiteProfiles Protein kinase domain profile. 407 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0435 712 MobiDBLite consensus disorder prediction 280 311 - -
Lal13g0435 712 Gene3D Phosphorylase Kinase; domain 1 378 482 - -
Lal13g0435 712 SUPERFAMILY L domain-like 28 280 - -
Lal13g0435 712 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 711 - -
Lal13g0435 712 MobiDBLite consensus disorder prediction 285 311 - -
Lal13g0435 712 Gene3D Transferase(Phosphotransferase) domain 1 483 711 - -
Lal13g0435 712 Gene3D Ribonuclease Inhibitor 21 80 IPR032675 -
Lal13g0435 712 Gene3D Ribonuclease Inhibitor 81 286 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0435 Lal-Chr13 2756639 2759343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0435 4 712 Receptor kinase-like Gene Family AT2G01210 65.556 0.0 948
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal13g0435 Pkinase 4.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0435 - - gmx:100792873 1122.07