Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0428 ATGGGGACGTTGGAAGAGAATCACAGAACGAAGGCACTGAATCTTCTCCGAACTAGAATTTGTGATCCCAAATTCATGTTCAAACCTCTCTATGATTCTGCTGACAGCAACTTTAGCAAGTTGAAATTCATGATATCAAGTTCAGTGACGGAGGCTTGCAACAATTCTATTCTCCTTCTTGGTCCACGTGGCTCTGGCAAAACCGAGGTTTTGGACCTTGTCATTCAAGACTTGTTCCTCCAATACCCAGACTCCATTTCAATGATCAGGTTGAATGGGCTTTTACATTTTGATGATGTCTCTGCATTCAAGGAAATAGCTAGGCAGTTGTGTATGGAGCATGAATTGCTGTTCTCAAAGGCGGCATCATTTGATGACAATTCCCAATTTATGGTGGCCATGCTAAAGGAATGTGGATTAGCACATAAAACAATAATTTTTATTCTGGATGAGTTTGACCTCTTTGCTCAGGGTAAACAGCGGTTACTTTATACTTTGCTTGATGCAATGCAATCAATAACATCTCAGGCTGTTGTACTTGGCATTAGTTGCCGACTGGATGCAGATCAGCTGTTGGAGAAAAGGGTACGTTCTCGTTTTTCACATAGAAAGCTGATCTTCTTACCACCTTCAATGGAAGACACGCAAAGGTTGTTGGCACATGTGCTGACATTGCCAATGAATTCAAGCTTTCCACATGAATATGCTGTTGAATTTAATAGCAAGGTCCAAAAAATTTTAGAAGACAAAAGGTTGAAAGAAACCTTCAATAAACATCTAAGTTTTGACTCCTCTGTGAAGCATTTACTGAGGCTCCTATTCTGTGCAATTTCTCATATGGATTTGCAGACTGGGTTTCTTTCCCGTGAGAACTTTGAAACGGCATTTTCAAGTATCCATAGGCAGCCCAAACTGGAATGTATAAGAAATTGTTCAATTTTGGAACTTTACATTTTGGTTTGCATGAAGAGGTTGGAGGTTAAAGAGCAAAGTTTGTGCAATTTCCATTCTGTGATGAAAGAGTATAAAAGTATACATGATTCCTTCCAGAATAGTGATTATTATGCACGAAATGCATTTGAACATCTTATAGACCGGGAATTAATATGTTTCACAGACAATAGAGGACATAGTTTATCTGTTGAATACCGTCCTGTAAAGCTTTTAATCTCACCCACTGAACTTCATCAAGGACTAAGAGCATATCAGCCATGCCCTATCGAAATGTAA 1230 0.3911 MGTLEENHRTKALNLLRTRICDPKFMFKPLYDSADSNFSKLKFMISSSVTEACNNSILLLGPRGSGKTEVLDLVIQDLFLQYPDSISMIRLNGLLHFDDVSAFKEIARQLCMEHELLFSKAASFDDNSQFMVAMLKECGLAHKTIIFILDEFDLFAQGKQRLLYTLLDAMQSITSQAVVLGISCRLDADQLLEKRVRSRFSHRKLIFLPPSMEDTQRLLAHVLTLPMNSSFPHEYAVEFNSKVQKILEDKRLKETFNKHLSFDSSVKHLLRLLFCAISHMDLQTGFLSRENFETAFSSIHRQPKLECIRNCSILELYILVCMKRLEVKEQSLCNFHSVMKEYKSIHDSFQNSDYYARNAFEHLIDRELICFTDNRGHSLSVEYRPVKLLISPTELHQGLRAYQPCPIEM 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0428 409 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 219 397 IPR032705 -
Lal13g0428 409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 225 IPR027417 -
Lal13g0428 409 CDD AAA 55 210 - -
Lal13g0428 409 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 10 407 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Lal13g0428 409 PIRSF ORC4 3 409 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Lal13g0428 409 Gene3D - 34 209 IPR027417 -
Lal13g0428 409 Pfam AAA ATPase domain 39 172 IPR041664 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0428 5 406 Core DNA Replication Machinery Family AT2G01120 63.196 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0428 K02606 - gmx:100800582 645.966