Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0394 ATGGAAGCCAAGCAGGAATTTGGAGTGGACCAACATTTGAACACAACAATCACTGGGACCAGTTTCTCTCAGTTACTATTGGGAGATGATGATAATGAAGATGATAATGCATTGGGTCTTGGTATGGACCAGACTTACAACAACAACAACAAAAACAAAAACAACAACAACAAAAACAACAACCTTACCGACTATTCTCCTATTTTCCCCATTCACATTGCACCACAAATGTTATGTTTTGGGAACTATCAAAATGAAGAGGACCTTACCAATGCATTAACCCCTCAGAAATCTGTCATCACTAATTCTAGTGATTCTTCTTCTGCTTCTTCTTGCAACCACACTACCACCTTCAATTCCTTATTATCTAAGCCCCATTTGAAGAGTTTGCAGAAAAAGCGAAATGTGTCTGGACAAGAACCTGTTACAAAAGCAGAGGTTGGAAGCCAGAGACCACCAAAGAAGACCAAAGCAGATAACCCCACTTCAACTGGACATGCAAAGAGAAAGGAGAAACTTGGGGAAAGAATTGCTGCATTACAACAGCTTGTTTCTCCATTTGGAAAGACAGATACAGCTTCAGTGCTTCACGAGGCAATGGGGTACATCAAATTTTTACAAGACCAAGTTCAAGTCCTTTGCTCCCCTTACCTGCAACGCTTGCCTTATTCACACCACCAACTTGGGGGCGGAGATAACAATGGAGAGGAAGTGACGAAAGATTTGAGGAGCAGGGGTCTTTGCCTGATCCCTATGGAATGCACCGTACACGTGGCAAGTAGCAACGGTGCTGATTTCTGGTCACCTGCTGCAATAGGGAACAATATTTCACCATCAACAACTATGCAGTGA 852 0.4261 MEAKQEFGVDQHLNTTITGTSFSQLLLGDDDNEDDNALGLGMDQTYNNNNKNKNNNNKNNNLTDYSPIFPIHIAPQMLCFGNYQNEEDLTNALTPQKSVITNSSDSSSASSCNHTTTFNSLLSKPHLKSLQKKRNVSGQEPVTKAEVGSQRPPKKTKADNPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIKFLQDQVQVLCSPYLQRLPYSHHQLGGGDNNGEEVTKDLRSRGLCLIPMECTVHVASSNGADFWSPAAIGNNISPSTTMQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0394 283 MobiDBLite consensus disorder prediction 99 118 - -
Lal13g0394 283 PANTHER OS01G0105700 PROTEIN 44 261 - -
Lal13g0394 283 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 157 206 IPR011598 GO:0046983
Lal13g0394 283 MobiDBLite consensus disorder prediction 41 61 - -
Lal13g0394 283 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 219 IPR036638 GO:0046983
Lal13g0394 283 Gene3D - 167 221 IPR036638 GO:0046983
Lal13g0394 283 CDD bHLH_AtbHLH_like 168 213 IPR045239 -
Lal13g0394 283 MobiDBLite consensus disorder prediction 123 171 - -
Lal13g0394 283 MobiDBLite consensus disorder prediction 36 61 - -
Lal13g0394 283 MobiDBLite consensus disorder prediction 123 144 - -
Lal13g0394 283 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 44 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0394 Lal-Chr13 2472572 2474966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0394 168 270 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 58.654 1.40e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0394 - - gmx:100809107 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0394 13 2472572 2474966 Lal13g0394 13 2472572 2474966 ECH