Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0392 ATGACTGGAGACAACAACAATGATGGGAGCAAAGGCAATAATCCAGAAGAGTGGTTGAACCTGAGCTTAGGAGGCACTTCATTCTCAACATCAGGAGATGCTGATTCAAAATCAAGACCTGCAACAACCAAAGTTTTTTCATGCAACTTCTGCATGAGGAAATTCTTTAGTTCACAAGCATTAGGAGGTCATCAGAACGCCCACAAAAGGGAGAGAGGTGCAGTAAAAAAATATCAGACTCAGAGGACGATGGCACTGACGGGTTTCTCCATGAACAATCGTATTTTTCAATCACTTGGTTTCCAGCCCCATGCACTCGTGCACAAACCATGCAGAGGAGTTAGATCTATGATAGCACCAAGCTTTCATGATGCATATGCAATGGCATGTACATCTTTCATGATTGATGAACAAACTGATCTGGTGTGGCCAGGCAGCTTTCGTTTAGTTCCAGAACAACCTGAGCCACCACAGGAGTCACTGAAGCTTGATTTAAACCTCAGACTTTGA 510 0.4353 MTGDNNNDGSKGNNPEEWLNLSLGGTSFSTSGDADSKSRPATTKVFSCNFCMRKFFSSQALGGHQNAHKRERGAVKKYQTQRTMALTGFSMNNRIFQSLGFQPHALVHKPCRGVRSMIAPSFHDAYAMACTSFMIDEQTDLVWPGSFRLVPEQPEPPQESLKLDLNLRL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0392 169 ProSitePatterns Zinc finger C2H2 type domain signature. 48 68 IPR013087 -
Lal13g0392 169 Gene3D Classic Zinc Finger 27 96 - -
Lal13g0392 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 46 73 IPR013087 -
Lal13g0392 169 PANTHER ZINC FINGER PROTEIN 4-LIKE 4 169 - -
Lal13g0392 169 SUPERFAMILY beta-beta-alpha zinc fingers 43 72 IPR036236 -
Lal13g0392 169 PANTHER ZINC FINGER PROTEIN 4-LIKE 4 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0392 Lal-Chr13 2460810 2461319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0392 5 157 C2H2 Transcription Factor Family AT1G24625 37.888 2.62e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0392 - - ahf:112779836 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0392 13 2460810 2461319 Lal13g0392 13 2460810 2461319 ECH
Lal13g0392 13 2460810 2461319 Lal24g0308 24 2190305 2190874 LSH