Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0354 ATGGGTTGGTTCTCCTTATTCTTAGGGAAAACAACAATGATGGTTCTTTCTCCAAGACCTTTATCCTTTGTTTATTGTATCCTTGTCATAATCATTTCCTTAACCAAAACCAGCTCAGAAATAATTTCAGTAAAGTACTGCAATCCAAGTGAATATAGTGGTAACTACACAACCAATAGCACCTATCATACAAACCTCAACACCCTCTTATCCAACCTCACTTCCAACACAGAAACCAACAACTACAATGGTTTCTACAATGTTTCATATGGCCAAAACACTAACAAAGTATATGCAATTGGGTTATGTAGAGGAGATGTTAAGAGAGATAATTGCCATAGTTGTCTCAACAATGCCATAGTCAATCTCACACAGTATTGTCCAAATCAGAAAGAGGCTTATGCATGGTATGATGATGAAACATGCTTGTTGTATTACTCAGACCGTTTAATATATGGTGTCCTTATAATTGAACCATGGGATTATTCTTGGGATGGAGAAAATGAAATGGTGGTGGATGCAGTTCAGTTCAATAGATCTCTCATAAATTTGATGGATAGTTTAATAACAAGAGCAGCATTAGGTGACTCTAGTCGTAAATATGCTACATCAAGTGTTGTTGGTCCTAATAATCATCAAACAATATATGGTCTTGTTCAGTGTAGGCCTGATTTGTCTGGGACAGATTGCTCTGGCTGCTTGAATGAGTCAATGTTAGCACTCCCGGGTTGTTGTAATAATATGAAAGGTGCTAGAATTCTTAGACCAAGTTGTATTTTGAGATATGGAACCAATACCCTTTTCTATGATCCTGAAGCAGATGCACCACCACCTGCCCCCTCTAACAATAACACTTCCTCACAAGGAAATAGCAATGTGTTAAAAGTTGCTCTCGCCGTAGCTTTACCTGTTGTTGTTGTTGTTCTGTTGCTTAGTTTTATCATCATCTACTTAAGAGTGAGGAAGCCAAAGCAAAGTTTTGAAGCTCAAGAAGATGATTATGAAATTCAAACCGCTGATTCATTACAATTCGACTTTGACGCCATACAAGAAGCTACAAATGACTTCTCTGATGCTAATAAACTTGGACAAGGTGGATTTGGGATTGTTTATAGGGGTAGGCTTTCCAATGGACAAGAGATTGCTGTCAAAAGGTTGTCAAGAGATTCTGGGCAAGGAGATATTGAATTCAAGAATGAAGTGCTTTTGGTGGCTAAGCTTCAACACAGAAATTTAGTTAGGCTACTTGGTTTCAGCATACAGAGAAAAGAAAGGTTACTTGTCTATGAATTTGTTCCTAATAAAAGCCTTGACCACTTCATATTTGATCCAACCGAGAAACGACAATTAGATTGGGAAAGCCGCTACAAAATCATTGGAGGAATTGCTCGAGGTATTGTTTACCTTCACGAGGATTCACGATTGCGCATTATTCACCGTGATCTCAAAGCAAGCAACATTCTCTTAGATGAAGAGATGAATCCTAAGATATCAGATTTTGGTATGGCAAGACTGTTTGATGTGGATCAAACTCAAGGAGAAACAAATAAAGTTGTTGGAACCTACGGATATATGGCACCAGAGTATGCACTGTGTGGACAATATTCAGTGAAGTCAGATGTCTTCAGTTTTGGTGTGTTGGTTCTTGAGATTGTAAGTGGCCGGAAGAGAAGCAGCATTCGTCATGGCGAGAATGTAGAGGATCTATTGAGCTTTGCATGGAGAAACTGGAGGGCGGGGACAGTAGCCAATATTGTGGATTCCACATTGACCAATGTTTCAGAAACTGAAATAATGAGATGTATCCATATTGGGTTACTTTGTATCCAAGAAAATGTTGCTGATAGACCAACCATGGGTGCCATTATTTTGATGCATAATAACAATTCTGTAAGTCTTGCAGTACCTTCAGAACCTCCATCTTCTGTGGATAGCAAAGATAGATTCCTTCCAGATATGCAGTCATGGGAGCATAATTCAGACCCAACAAGATCAAGGGAATCCACAAATACATCAGCTCCAATATCAGTCAATGAAGCTTCAATTTCTGAGTTATTTCCACGTTAG 2067 0.387 MGWFSLFLGKTTMMVLSPRPLSFVYCILVIIISLTKTSSEIISVKYCNPSEYSGNYTTNSTYHTNLNTLLSNLTSNTETNNYNGFYNVSYGQNTNKVYAIGLCRGDVKRDNCHSCLNNAIVNLTQYCPNQKEAYAWYDDETCLLYYSDRLIYGVLIIEPWDYSWDGENEMVVDAVQFNRSLINLMDSLITRAALGDSSRKYATSSVVGPNNHQTIYGLVQCRPDLSGTDCSGCLNESMLALPGCCNNMKGARILRPSCILRYGTNTLFYDPEADAPPPAPSNNNTSSQGNSNVLKVALAVALPVVVVVLLLSFIIIYLRVRKPKQSFEAQEDDYEIQTADSLQFDFDAIQEATNDFSDANKLGQGGFGIVYRGRLSNGQEIAVKRLSRDSGQGDIEFKNEVLLVAKLQHRNLVRLLGFSIQRKERLLVYEFVPNKSLDHFIFDPTEKRQLDWESRYKIIGGIARGIVYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGMARLFDVDQTQGETNKVVGTYGYMAPEYALCGQYSVKSDVFSFGVLVLEIVSGRKRSSIRHGENVEDLLSFAWRNWRAGTVANIVDSTLTNVSETEIMRCIHIGLLCIQENVADRPTMGAIILMHNNNSVSLAVPSEPPSSVDSKDRFLPDMQSWEHNSDPTRSRESTNTSAPISVNEASISELFPR 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0354 688 ProSiteProfiles Protein kinase domain profile. 356 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0354 688 Pfam Protein kinase domain 357 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0354 688 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Lal13g0354 688 CDD STKc_IRAK 362 625 - -
Lal13g0354 688 MobiDBLite consensus disorder prediction 635 688 - -
Lal13g0354 688 ProSiteProfiles Gnk2-homologous domain profile. 44 151 IPR002902 -
Lal13g0354 688 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 670 - -
Lal13g0354 688 Gene3D Phosphorylase Kinase; domain 1 319 431 - -
Lal13g0354 688 Gene3D - 41 150 IPR038408 -
Lal13g0354 688 Gene3D - 163 266 IPR038408 -
Lal13g0354 688 MobiDBLite consensus disorder prediction 650 664 - -
Lal13g0354 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Lal13g0354 688 Gene3D Transferase(Phosphotransferase) domain 1 432 635 - -
Lal13g0354 688 ProSiteProfiles Gnk2-homologous domain profile. 157 267 IPR002902 -
Lal13g0354 688 Pfam Salt stress response/antifungal 175 264 IPR002902 -
Lal13g0354 688 Pfam Salt stress response/antifungal 47 148 IPR002902 -
Lal13g0354 688 MobiDBLite consensus disorder prediction 665 679 - -
Lal13g0354 688 SMART serkin_6 356 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0354 688 SUPERFAMILY Protein kinase-like (PK-like) 344 652 IPR011009 -
Lal13g0354 688 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 19 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0354 Lal-Chr13 2236099 2240026 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0354 50 639 Receptor kinase-like Gene Family AT4G38830 50.493 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal13g0354 Pkinase 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0354 - - lang:109335396 1180.62