Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0352 ATGAATGAAAAACAAAACAAAGGTGCACATATCAATACTGTTATGATCACAGAGATGTTTCAGTTCAACAACCACATAACCTCATTTCTGTTATTTTCTATGTTCTTTGGATCACTTACCTCAGCATCTCCAAATTACAATGGTATATATTGTCCAAACAACATCACCTACGAAATCAACAACAACACTATCTTCCAAACCAATCTCAATGTCCTTCTTTCTTCTCTCCTCTCCAACGCCACCCAAGGCAGTAGCTCCTACACCACCGCCATGGGAATGGGCACCAGCAACGCCTTCAACGGCCTCTACCTATGTCGCGGCGATGTCTCATCGAAAACCTGTTCAGAGTGCATAGCTGCAGTGGTAACAAACATAACAAAACTCTGCCCAAACAAGAAAGAGTCCATAATATGGTATGATGAGTGCATGTTGCATTACTCAAACACTTACTTCAACCCTTTAAGCATTGACCCAAGATTGAATTTGTGGGATAACAAAAACATATCCACCTTGGATGTAGATAACTTCAACGAAATGCTTTTAAGCTTCTTGGGAAGTTTGGCTTCACATGCTTCGAATAGTGAGTCATCGATGAGATTTTCAACTGGGGAATGGAACTTCACGAAGGAGATAACAGTGTATGGATTGGCACAGTGTTTTCCTGGTGTGACAAATGAACAGTGTGAGGGGTGTTTGGTAAATGCTTCTAGGACTCTTGTTACGTGTTGTGAAGGAAAACAAGGTGCACGAGCTTTGCTTGCATGGTGTAATATCAGATACGATTTGTTCCAATTTTACAATACAACTGAAACATCTGAATCTCCACCACTTTTTTCTACTCCTCCTCCTTCAGTTGGGGATGAAAGTGAGGCTTTGGAATCATTACAATATAATTTATCAACAATTGAGGCTGCAACAGAAAAGTTTTCAAATGAAAACAAAATAGGCAAGGGAGGATTTGGAGAAGTTTACAAGGGTATTCTTTCAAATGGACGAGAAATAGCTGTAAAAAAACTCTCCCAAAGTTCAGGACAAGGGGCAATTGAATTCAAGAATGAGGTTTTATTGATAGCCAAACTTCAACACAGAAATTTGGTTGCTTTATTAGGATTTTGCTTGGAGGCACAAGAGAAAATGCTCATTTATGAGTATGTGCCCAATAAAAGCCTTGATTACTTTCTATTTGATCCTCTTAAGAGCAAATTGTTGAATTGGTCGGAGCGTTATAAAATTATTAAAGGGATCGCACAAGGAATTCATTACTTACATGATCATTCAAGGTTGAAAATTATACATCGTGATCTCAAAGCAAGTAATGTATTGTTAGATAGCAGCATGAATCCAAAGATATCAGACTTTGGCATGGCAAGAATAATTGGTTTAGATCAAGATCGAGGAAATACAAATAGAATTGTTGGAACATATGGCTATATGTCTTCAGAATATGCAATGTATGGACAATTTTCAGAAAAATCAGATGTATTTAGTTTTGGAGTCATACTTCTGGAGATAATTAGTGCAAAGCGAAATGCACGTTCAATTTTGTCAGATGATGTTGATTACCTCTTGAGTTATGCATGGAAACAATGGAGGGATGAAACACCAATAAAATTATTAGACCAAGATATTAAAGAATCTTGCAATCAAAGTGAAGTGATTAAGTGCATTCAAATTGGTTTGTTATGTGTACAAGATAAACCAGATGATAGACCTACTATGGCAAAAGTTGTTTCTTATTTCTGTAACTCTGACTCTGAAACTGAGTTGCCATTTCCTGGAGAACCAATAAATTCTATGAATAATCAAATATTGCAAAAGACAGTAACAGCAGGAGAGTCAAGTTCTGGTTCTATACAATTCACTGAATTGTCTATGCCTAGGGGATATTCTTCAAGTTTAAAGGCTATGACACATTCAAGAGTGATTTTCCTTCTTTGTCTCCTTGTTATTATACTCATAAATCATGCCATAGCCCAGCAAAGGTTCCTGTCCAATGTCTGCAATGATAATTTAGGCAACTATACTGCAAACAGTACCTACAAGACCAATCTGAATACCCTTTTGTCTAGTTATTCTTCCAACACACAAAATGATTATGGTTTCTACAATTTCTCTCAGGGTCAAGACTCTGACAAAGTTAATGGAATTGGGATGTGTAGAGGAGATGTTACACCAGATGTGTGTCGCAGTTGCCTCAATGATTCAACAGTCTTTCTCACAGAGAGTTGCCCAAATCAGAAAGAGGCCATTGTATGGTATGATAATTGCATGTTACGCTACTCGAACCGCTCAATATTTGGTGTTATGGAACCTGATCCTAAGTTCTATATTTATCCATTAACCAATGCAACTGATATGGATCAGTTTGATGATGTTCTTAGGGACTTGGTTGATAATCTGAGTAGTATAGCTGCATCTGGTGATTCCTTTAAAAAGTATGCTGCAGGAAGTGCACAGGGTCCAAGTTTTCAAACTATATTTGCACTTTTGCAATGCACACCTGATTTATCAGAGCAAGAGTGCAATGATTGCTTGGTAGGTAGCATCACAGATATCTCAAGTTGTTGTTCTGGCAGAATAAATGGCAGAATTGGAAAACCAAGTTGCAATCTTAGATTCGATACATCGCCGTTCTATGACTCTACAGTTAATAACTCTCAACCTTCAGCACCACAAGTTCCTCCTCCTCCACTCACCAATACCACTTCCACACAAGGAAATAGCAACACAACAACAATTGTCGTTGCGGTAGTTGTTCCTGTTGTTGCCATTGCTGTTCTGATTATCTTAGTCTACATCTTCTTAAGAGCAAGGAAGCAAAGGGAAAATATTGACACTGACACTGAACTTGACAATGAAATCGAACCTGTTGAGATTGAGACATTGCAATTCAACTTTGACAATATCAGAATGGCTACAAATAACTTTTCTGAGGCAAATATGCTAGGAAAAGGAGGGTTTGGATCTGTTTACAAGGGTAAGCTTTCCAATGGACAAGATGTTGCTGTAAAAAGGTTGTCAATGAATTCTGGACAAGGAGATACAGAATTCAAGAATGAAGTGCAGTTAGTAGCCAAACTTCAACACCGAAATTTAGTCAGACTATTTGGTTTCAGTTTGGAAAAAAAAGAAAGGTTACTGGTCTATGAGTTTGTTCCCAATAAAAGCCTTGATTATTTCATTTTTGATCCAATTAAGCGTGTGCATTTGGATTGGGAAAGGCGATATAAAATCATAGGAGGCATTGCCAAAGGCCTTCTTTACCTTCATGAGGATTCACGTCTGCGTATTATTCATCGTGATCTCAAAGCAAGCAACATTCTCTTAGATGCAGAGATGAATCCTAAGATATCAGATTTTGGGATGGCAAGATTGTTTGTTCCGGATCAAACTCAAGGAAACACAAACAGAATTGTTGGAACTTATGGATATATGGCACCTGAGTATGTGATGCAAGGACAATTCTCTGTCAAGTCAGATGTTTTCAGCTTCGGCGTGCTGGCTCTAGAGATAGTATGTGGCCAGAAAAATAGTGGCTTCCGTAACGGAGAGCATGTAGAGGATCTATTAAGCGTTGCCTGGAAAAACTGGAAGGATGGAACAGCATCAAATTTGATAGATCCTACTCTAAATAATGGTTCAAGAAATGAAATCATGAGATGCATCCACATTGGCTTACTATGTGTTCAGCAAAATTTAGCTGATAGACCTACCATGGCTTCTGTTGTACTCATGCTTAATAGTTACTCTACCACTCTCCCAGTACCTTCAGAGCCTGCATTTTTTATGCAGAGTAGAGGTATGTCACATATTCAATCATGGGAATATAATTCAAAGGCAACAGAGTCTACCAAGTCTGTTAAAGCATACTCAAGTGGGGACTTAACAACTCGGAATTACCCTCGATAG 3909 0.3822 MNEKQNKGAHINTVMITEMFQFNNHITSFLLFSMFFGSLTSASPNYNGIYCPNNITYEINNNTIFQTNLNVLLSSLLSNATQGSSSYTTAMGMGTSNAFNGLYLCRGDVSSKTCSECIAAVVTNITKLCPNKKESIIWYDECMLHYSNTYFNPLSIDPRLNLWDNKNISTLDVDNFNEMLLSFLGSLASHASNSESSMRFSTGEWNFTKEITVYGLAQCFPGVTNEQCEGCLVNASRTLVTCCEGKQGARALLAWCNIRYDLFQFYNTTETSESPPLFSTPPPSVGDESEALESLQYNLSTIEAATEKFSNENKIGKGGFGEVYKGILSNGREIAVKKLSQSSGQGAIEFKNEVLLIAKLQHRNLVALLGFCLEAQEKMLIYEYVPNKSLDYFLFDPLKSKLLNWSERYKIIKGIAQGIHYLHDHSRLKIIHRDLKASNVLLDSSMNPKISDFGMARIIGLDQDRGNTNRIVGTYGYMSSEYAMYGQFSEKSDVFSFGVILLEIISAKRNARSILSDDVDYLLSYAWKQWRDETPIKLLDQDIKESCNQSEVIKCIQIGLLCVQDKPDDRPTMAKVVSYFCNSDSETELPFPGEPINSMNNQILQKTVTAGESSSGSIQFTELSMPRGYSSSLKAMTHSRVIFLLCLLVIILINHAIAQQRFLSNVCNDNLGNYTANSTYKTNLNTLLSSYSSNTQNDYGFYNFSQGQDSDKVNGIGMCRGDVTPDVCRSCLNDSTVFLTESCPNQKEAIVWYDNCMLRYSNRSIFGVMEPDPKFYIYPLTNATDMDQFDDVLRDLVDNLSSIAASGDSFKKYAAGSAQGPSFQTIFALLQCTPDLSEQECNDCLVGSITDISSCCSGRINGRIGKPSCNLRFDTSPFYDSTVNNSQPSAPQVPPPPLTNTTSTQGNSNTTTIVVAVVVPVVAIAVLIILVYIFLRARKQRENIDTDTELDNEIEPVEIETLQFNFDNIRMATNNFSEANMLGKGGFGSVYKGKLSNGQDVAVKRLSMNSGQGDTEFKNEVQLVAKLQHRNLVRLFGFSLEKKERLLVYEFVPNKSLDYFIFDPIKRVHLDWERRYKIIGGIAKGLLYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMARLFVPDQTQGNTNRIVGTYGYMAPEYVMQGQFSVKSDVFSFGVLALEIVCGQKNSGFRNGEHVEDLLSVAWKNWKDGTASNLIDPTLNNGSRNEIMRCIHIGLLCVQQNLADRPTMASVVLMLNSYSTTLPVPSEPAFFMQSRGMSHIQSWEYNSKATESTKSVKAYSSGDLTTRNYPR 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0352 1302 Pfam Protein kinase domain 978 1183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0352 1302 ProSitePatterns Protein kinases ATP-binding region signature. 315 338 IPR017441 GO:0005524
Lal13g0352 1302 SMART serkin_6 309 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0352 1302 SMART serkin_6 976 1250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0352 1302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Lal13g0352 1302 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 639 1286 - -
Lal13g0352 1302 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 291 603 - -
Lal13g0352 1302 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 29 276 - -
Lal13g0352 1302 Gene3D Phosphorylase Kinase; domain 1 937 1051 - -
Lal13g0352 1302 Gene3D Phosphorylase Kinase; domain 1 285 384 - -
Lal13g0352 1302 Gene3D Transferase(Phosphotransferase) domain 1 1052 1254 - -
Lal13g0352 1302 Gene3D Transferase(Phosphotransferase) domain 1 385 590 - -
Lal13g0352 1302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1097 1109 IPR008271 GO:0004672|GO:0006468
Lal13g0352 1302 Gene3D - 159 265 IPR038408 -
Lal13g0352 1302 Gene3D - 775 878 IPR038408 -
Lal13g0352 1302 Gene3D - 659 764 IPR038408 -
Lal13g0352 1302 Gene3D - 48 151 IPR038408 -
Lal13g0352 1302 SUPERFAMILY Protein kinase-like (PK-like) 294 605 IPR011009 -
Lal13g0352 1302 ProSitePatterns Protein kinases ATP-binding region signature. 982 1004 IPR017441 GO:0005524
Lal13g0352 1302 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 639 1286 - -
Lal13g0352 1302 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 29 276 - -
Lal13g0352 1302 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 291 603 - -
Lal13g0352 1302 MobiDBLite consensus disorder prediction 883 906 - -
Lal13g0352 1302 ProSiteProfiles Protein kinase domain profile. 976 1250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0352 1302 ProSiteProfiles Gnk2-homologous domain profile. 45 151 IPR002902 -
Lal13g0352 1302 Pfam Protein tyrosine and serine/threonine kinase 311 578 IPR001245 GO:0004672|GO:0006468
Lal13g0352 1302 SUPERFAMILY Protein kinase-like (PK-like) 959 1276 IPR011009 -
Lal13g0352 1302 ProSiteProfiles Protein kinase domain profile. 309 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0352 1302 CDD STKc_IRAK 315 582 - -
Lal13g0352 1302 ProSiteProfiles Gnk2-homologous domain profile. 771 878 IPR002902 -
Lal13g0352 1302 ProSiteProfiles Gnk2-homologous domain profile. 156 265 IPR002902 -
Lal13g0352 1302 Pfam Salt stress response/antifungal 782 875 IPR002902 -
Lal13g0352 1302 Pfam Salt stress response/antifungal 667 762 IPR002902 -
Lal13g0352 1302 Pfam Salt stress response/antifungal 57 148 IPR002902 -
Lal13g0352 1302 Pfam Salt stress response/antifungal 174 261 IPR002902 -
Lal13g0352 1302 ProSiteProfiles Gnk2-homologous domain profile. 662 765 IPR002902 -
Lal13g0352 1302 CDD STKc_IRAK 982 1247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0352 Lal-Chr13 2227448 2234985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0352 287 627 Receptor kinase-like Gene Family AT4G21410 50.716 1.10e-105 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal13g0352 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0352 - - lang:109353867 1219.53