Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0351 ATGGGTATTGTCTTGTTTTTCATTCTCACCTTCTTCAACTTTCCCACAACCTTATTAGCAAATGATCTTATGTACCTAAAGCACACATGTTCAAACCAAAAAACCTTCACTCCCACCAATAGCGCTTACCAATCCAACCTCCACACCCTCCTCACCTCCCTATCTTCCCACGCCGCCGCCACCGATTTCTACAACACCACCGTGGCGGCTGGAAGCGAAACCATCTATGGCCTCTTCATATGCCGTGGTGATGTCACAAACCAGACGTGCCAAAAGTGCATGGCAAAGGCAACCCTAGAAATATCATCAAAATGTCCTTACTCCAAAGAAGCCATAATTTGGTATCACCAGTGCATGGTTCGTTATTCCAACCGTTGTTTCTTCTCCACTGTGGATGAATGGCCAAGGCATAAGTTCATGAATTATAGCGTGACTACAAATTCAACCAAAGAAGGAAGCTATGGTTGGTTGTTAGCTAACACTTTAAGTGAAGCAGTTGCTGAAGCTGCAAACTCTGGCCCTCAAGGTACGAAGAAATTTGCAACGAAAAATGCTACTTTGCCTGGGTCTGAGAAACAGAAAGTGTATACTCTTGTTCAGTGCACCCATGATTTGTCAAGCCAAGATTGTAATAGGTGTCTGAGTGATATAATGAGTGATATTCCTTTGTGTTGTCTTGGAAAGGATTGTGGAATGGTTCTATATCCAAGTTGCAGTTTGATGTTTGGGATAGATCAATTCTATAGGGATATTGCTCTTGCACGCATGCACCCTGCACCATCTTCTCGTGTTCCACCACAATCATCACATTCAGGAAAGGCCACATTAAGATTGATCAACATAGCCATGGTTCCAATTGTATTTTTGTTGATGCTCTTCTTCGCCAATCGTATCAGACGGCTTAATGAGCTAAGGCGTTATAAGGCTATTTTCAAAGAAAATTTTGGAAATGAAAGTACTACTTTGGAGTCACTGCAATTTGACTTTGCTGCAATTGAAGCAGCAACAAATAAGTTTTCTGATGAGAACCTTATAGGCCAAGGTGGATTTGGAGAAGTTTACAAGGGTACTCTTCATGATGGTCGAGAAGTAGCTGTAAAGAGACTCTCAAAAAGTTCTGGACAAGGTGCAGCAGAATTCAAGAATGAGGTTTTACTAATAGCCAAGCTTCAACACAGGAACTTAGTGGCATTATTAGGATTTTGCTTACAAGAGGATGAGAAAATACTTGTTTATGAGTTTGTTCCAAACAAGAGCCTTGACTATTTTTTATTCGATCCTCAAAAGCAAAGGCTGTTAAGTTGGTGTGAGAGATATAAAATTATAGGAGGAATTGCTCAAGCAATTCAATATTTACATGAATATTCTCGTCTTAAAATCATACATCGAGACATCAAACCTAGTAATGTTTTATTAGATGACAAAATGAATCCAAAAATTTCAGATTTTGGAATGGCAAGAATGGTTGCTATAGACCAAGAACAAGGACGGACAAATAGAATTGTAGGAACATATGGTTATATGTCTCCAGAATATGCCATGCTTGGAAAGTTTTCTGAGAAATCAGATATCTTCAGCTTTGGAGTTCTGGTTTTGGAGATAATCAGTGGGAGAAAACATTCTACCTCTTATCAACCATACAATGTTGATGGCCTATTGAGTTATGCTTGGAAACAATGGAGAGATGGGGCACCATTTCAAATATTGCATCCAAGTCTGAGTGTATCGTGTTCTGAAACTGAAGTTATGAAGTGCATTCAGATTGGTTTATTATGTGTTCAAGAAAATCCTGATGATAGGCCATTAATGGCTGGAGTCGTTTCATATCTAAGCAATTCTTCAATCGAATTGCCATTACCGCGGGAGCCAGCGTTTTTTATACATGGTGGAATGGAAATAAACAAGGTTGCAATGGAATTAAAATTTGGCCATGTAGCCAAGAGTATCACTACATATTCTATCAATGAAATGTCTATTACTGAATCTTTTCCTCGATACTTTGCAAGTGATAGTGAAGCATCTCCCATATACAGTGCTCATGTCTGCACAGATGGATCCTATTTCAGTCCAAACACAACATTCCAAACCAACTTGAACCTCCTCCTCTCTTCCCTTGTATCCAATACCACCCTCGGCCAAGGTTTCTACCGCACTTCGGTGGCAAAAGGATCCCCTGATGAAGTCAAGGGACTCTTCCTCTGCCGCGGTGATATATCCCCCACTGTCTGTGAGGACTGTGTCTCCGCCGCAGCGGAAAATATAACAAGTCATTGCACCAACACAACAGAGTCCATAATTTGGTATGATGAGTGCATGATTCGTTACACAAACCTTTCTTTCTTGAACAACATAGTCCCTAGCGTGAACTTAAAGAATGTGAATAACGTCCCTGACTTTGACCGTGATTATTTTAGTAATCTACTGTCAACAACGTTGACAAATTTAACAGGAAGTGCAACAAATTCTGGTTCGGGTAACAAATTTGCTACGAAAGAAGTTGAGTTAACGAGGATGTCAGAGAAGCTGTACACACTGGCACAGTGCACTCCTGACTTAAGCACTTTTGATTGTAACATGTGTTTCTCAAGCGCTATTAGTGGTCTTCCAAGTTGCTGTAATGGAACAATAGGTGCAAGATCTCTTCTTCCAAGTTGTAATGTCAGATTTGAGTTATATCCATTTTACAATGTCTCTGCCATAACTGAACCACTACCCCCTCCTCCTTCAGGAAGAAGTGATGACTTTGTAGGAAAAAGCAATACTTCTATAACTATTGCCATTGTTGTCCCAATTGTTGTTGCTGTTGCACTTTTCCTTCTTGGCTGCTGGTTCCTGTGTAAGAGGGCAAGGAAGGATTATAATACATTCATCCAGGATTCAATTCCGGATGATCTTAAAGATGCAGAGTCCTTGCAATTTGACTTGGCTGCAATTGGAGTTGCCACAAACAACTTCTCAGATGAGAACAAGATTGGCCGAGGTGGATTTGGTGTTGTTTATAAGGGTATCCTCCCTGATGGACAGGTGATAGCTGTGAAAAGGTTGTCCGTAACCTCCTTGCAGGGTCCATTAGAGTTCAGGAATGAAGCTTCCCTTGTGGCCAAGCTTCAACATAGGAATTTAGTAAGGCTATTGGGATTTTGCTTGGAGGGGCATGAGAAGCTTCTTATCTATGAATATATACCGAACAAAAGCCTTGACTACTTTCTATTTGATCCTGTGAAGCAAATAGAGTTAGATTGGTCAACTCGCTACAAAATTATAGTTGGCATTGCTCGAGGAATTCTTTACCTTCATGAAGATTCCCTGATTAGAATTATACATCGTGATCTCAAAGCTAGCAATGTTCTATTAGATGAAAATATGAACCCGAAGATTTCAGATTTTGGCATGGCGAAAATTTTCCAGGCAGATCAGACTCAAGTAAATACAGGAAGGATAGTTGGGACATATGGTTACATGTCTCCAGAGTATGCAATGCGCGGACAGTTCTCTGTAAAATCAGACGTGTTCAGCTTTGGTGTCTTAGTTTTGGAGATTGTGAGTGGGAAGAAGAACACTGATTTTTTTCAATCACAACATGCTGATGACCTCTTAAGCTATGCTTGGATAAATTGGTCAGGGAATACACCTCTGGAGTTGTTAGATCCAACACTGAGGGGTTCTTATTCAAGAAACGAAGTCATCCGATGCATCCATATTGGTTTATTGTGTGTGCAGGAAAATCCAAATGACCGGCCTTCAATGGCGACTATTGCATTAATGCTGAACAGCTATTCAGTAACCTTGTCATTGCCTCGACAACCAACTTCTTTCCTACGTGGAAGAACACCAACCAGGTTAAAAGATGGCCTTGATTCTAGTCAGTCTACCACCTGTTCAATTCCATGGTCTACAAATGAAGCATCCATTACCGAATTACATCCTCGATAA 3933 0.4058 MGIVLFFILTFFNFPTTLLANDLMYLKHTCSNQKTFTPTNSAYQSNLHTLLTSLSSHAAATDFYNTTVAAGSETIYGLFICRGDVTNQTCQKCMAKATLEISSKCPYSKEAIIWYHQCMVRYSNRCFFSTVDEWPRHKFMNYSVTTNSTKEGSYGWLLANTLSEAVAEAANSGPQGTKKFATKNATLPGSEKQKVYTLVQCTHDLSSQDCNRCLSDIMSDIPLCCLGKDCGMVLYPSCSLMFGIDQFYRDIALARMHPAPSSRVPPQSSHSGKATLRLINIAMVPIVFLLMLFFANRIRRLNELRRYKAIFKENFGNESTTLESLQFDFAAIEAATNKFSDENLIGQGGFGEVYKGTLHDGREVAVKRLSKSSGQGAAEFKNEVLLIAKLQHRNLVALLGFCLQEDEKILVYEFVPNKSLDYFLFDPQKQRLLSWCERYKIIGGIAQAIQYLHEYSRLKIIHRDIKPSNVLLDDKMNPKISDFGMARMVAIDQEQGRTNRIVGTYGYMSPEYAMLGKFSEKSDIFSFGVLVLEIISGRKHSTSYQPYNVDGLLSYAWKQWRDGAPFQILHPSLSVSCSETEVMKCIQIGLLCVQENPDDRPLMAGVVSYLSNSSIELPLPREPAFFIHGGMEINKVAMELKFGHVAKSITTYSINEMSITESFPRYFASDSEASPIYSAHVCTDGSYFSPNTTFQTNLNLLLSSLVSNTTLGQGFYRTSVAKGSPDEVKGLFLCRGDISPTVCEDCVSAAAENITSHCTNTTESIIWYDECMIRYTNLSFLNNIVPSVNLKNVNNVPDFDRDYFSNLLSTTLTNLTGSATNSGSGNKFATKEVELTRMSEKLYTLAQCTPDLSTFDCNMCFSSAISGLPSCCNGTIGARSLLPSCNVRFELYPFYNVSAITEPLPPPPSGRSDDFVGKSNTSITIAIVVPIVVAVALFLLGCWFLCKRARKDYNTFIQDSIPDDLKDAESLQFDLAAIGVATNNFSDENKIGRGGFGVVYKGILPDGQVIAVKRLSVTSLQGPLEFRNEASLVAKLQHRNLVRLLGFCLEGHEKLLIYEYIPNKSLDYFLFDPVKQIELDWSTRYKIIVGIARGILYLHEDSLIRIIHRDLKASNVLLDENMNPKISDFGMAKIFQADQTQVNTGRIVGTYGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVSGKKNTDFFQSQHADDLLSYAWINWSGNTPLELLDPTLRGSYSRNEVIRCIHIGLLCVQENPNDRPSMATIALMLNSYSVTLSLPRQPTSFLRGRTPTRLKDGLDSSQSTTCSIPWSTNEASITELHPR 1310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0351 1310 ProSiteProfiles Gnk2-homologous domain profile. 136 247 IPR002902 -
Lal13g0351 1310 ProSitePatterns Protein kinases ATP-binding region signature. 991 1013 IPR017441 GO:0005524
Lal13g0351 1310 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Lal13g0351 1310 SUPERFAMILY Protein kinase-like (PK-like) 323 627 IPR011009 -
Lal13g0351 1310 Pfam Salt stress response/antifungal 682 777 IPR002902 -
Lal13g0351 1310 Pfam Salt stress response/antifungal 802 892 IPR002902 -
Lal13g0351 1310 Pfam Salt stress response/antifungal 30 124 IPR002902 -
Lal13g0351 1310 Pfam Salt stress response/antifungal 147 242 IPR002902 -
Lal13g0351 1310 Gene3D - 22 127 IPR038408 -
Lal13g0351 1310 Gene3D - 787 894 IPR038408 -
Lal13g0351 1310 Gene3D - 675 780 IPR038408 -
Lal13g0351 1310 Gene3D - 137 247 IPR038408 -
Lal13g0351 1310 Pfam Protein tyrosine and serine/threonine kinase 988 1253 IPR001245 GO:0004672|GO:0006468
Lal13g0351 1310 ProSiteProfiles Protein kinase domain profile. 985 1260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0351 1310 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 663 - -
Lal13g0351 1310 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 683 1308 - -
Lal13g0351 1310 ProSiteProfiles Gnk2-homologous domain profile. 784 894 IPR002902 -
Lal13g0351 1310 Pfam Protein kinase domain 340 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0351 1310 Gene3D Transferase(Phosphotransferase) domain 1 415 617 - -
Lal13g0351 1310 Gene3D Transferase(Phosphotransferase) domain 1 1061 1265 - -
Lal13g0351 1310 SMART serkin_6 985 1260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0351 1310 SMART serkin_6 339 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0351 1310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1106 1118 IPR008271 GO:0004672|GO:0006468
Lal13g0351 1310 Gene3D Phosphorylase Kinase; domain 1 303 414 - -
Lal13g0351 1310 Gene3D Phosphorylase Kinase; domain 1 950 1060 - -
Lal13g0351 1310 SUPERFAMILY Protein kinase-like (PK-like) 972 1280 IPR011009 -
Lal13g0351 1310 CDD STKc_IRAK 345 610 - -
Lal13g0351 1310 CDD STKc_IRAK 991 1257 - -
Lal13g0351 1310 ProSiteProfiles Gnk2-homologous domain profile. 676 780 IPR002902 -
Lal13g0351 1310 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 683 1308 - -
Lal13g0351 1310 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 12 663 - -
Lal13g0351 1310 ProSiteProfiles Gnk2-homologous domain profile. 24 127 IPR002902 -
Lal13g0351 1310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Lal13g0351 1310 ProSiteProfiles Protein kinase domain profile. 339 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0351 Lal-Chr13 2218612 2226964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0351 3 665 Receptor kinase-like Gene Family AT4G05200 44.444 5.72e-175 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal13g0351 PK_Tyr_Ser-Thr 8.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0351 - - pavi:110754814 1266.52