Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0328 ATGTCTGATTCAGATCATTGCCCTTTTGACTCTCCTAGAATTGTTATGAACAAGGTTTTATCCAAATCTCAACAAGAAGGTGATGGAGCAATAGTCAGAAGAGGCATTGGAAGAAGCGAGTTGCCAAGGTTGGATCCATTTCTGATGTTGGATCACTTCTCAGTAACCCCTCCTGCAGGGTTTCCTGACCATCCACACAGAGGTTTTGAAACTGTCACCTATATGCTAGAGGGAGGGATAACTCATGAAGATTTTGCTGGGCGCAAAGGTACAATAAAAAGTGGTGATGTTCAGTGGATGACAGCAGGTAGAGGAATTGTTCATTCTGAAATGCCTGCAGGAGAAGGAACTCATAGGGGAATACAATTATGGATTAATCTATCTGCTACAGACAAAATGATTGAACCTAACTATCAAGAGCTTGTAAGTGAGGACATACCATCAGCAAAGGAAGATGGTGTTGAAGTAAGGGTTATAGCAGGAGAAGCAATGGGAGTACATTCACCAGTTTACACTAGAACACCTACCATGTTCCTTGATTTTACTCTCAGCCCTGGAGCTGAATTGCACCAAACTATTCCAGACTCATGGAATGCCTTTGTTTATGTGATTGAAGGAGAAGGATATTTTGGTTTCCAATGCTGTTCACCAATTACAAGTCACCATGTAATAGTATTAAGTCTAGGTGATGGTGTTAGTGTATGGAACAAGTCAACAAAGGCATTGAGGTTTGTGTTGATTGGAGGAAAGCCACTGAATGAGCCAGTGGCACAGTATGGTCCATTTGTGATGAATACACAATCTGAAATTGAAAAAACCATTCAGGACTATCATTATAGCAAGAATGGGTTTGAGAATGGAAAATCTTGGAGATCTCAATAG 882 0.4082 MSDSDHCPFDSPRIVMNKVLSKSQQEGDGAIVRRGIGRSELPRLDPFLMLDHFSVTPPAGFPDHPHRGFETVTYMLEGGITHEDFAGRKGTIKSGDVQWMTAGRGIVHSEMPAGEGTHRGIQLWINLSATDKMIEPNYQELVSEDIPSAKEDGVEVRVIAGEAMGVHSPVYTRTPTMFLDFTLSPGAELHQTIPDSWNAFVYVIEGEGYFGFQCCSPITSHHVIVLSLGDGVSVWNKSTKALRFVLIGGKPLNEPVAQYGPFVMNTQSEIEKTIQDYHYSKNGFENGKSWRSQ 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0328 293 CDD cupin_pirin_C 175 251 - -
Lal13g0328 293 Pfam Pirin 33 125 IPR003829 -
Lal13g0328 293 CDD cupin_pirin_N 32 127 - -
Lal13g0328 293 Gene3D Jelly Rolls 26 278 IPR014710 -
Lal13g0328 293 PIRSF Pirin 11 291 IPR012093 -
Lal13g0328 293 Gene3D Jelly Rolls 147 252 IPR014710 -
Lal13g0328 293 SUPERFAMILY RmlC-like cupins 13 291 IPR011051 -
Lal13g0328 293 PANTHER PIRIN-LIKE PROTEIN 1 293 - -
Lal13g0328 293 Pfam Pirin C-terminal cupin domain 178 282 IPR008778 -
Lal13g0328 293 PANTHER PIRIN-RELATED 1 293 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0328 Lal-Chr13 2060717 2063182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0328 12 288 Calmodulin-binding Proteins AT3G59220 63.082 2.63e-129 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0328 K06911 - jre:108986319 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0328 13 2060717 2063182 Lal13g0328 13 2060717 2063182 ECH