Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0321 ATGAAAGGAGGTTCAAAGCGCAAAATTGACGGTGGTAAAGAAGAATTCCGAGCTGCGAAGAGGGAACGGCTCAATGAAAACGCTGAGGAGGAAGAACATGAACAAGACCCCGCTACTCGCAGAATTATTCGCTCCCAATTCCTCGAACTCAAAACTCTCATCAACGATAAAAGGGATGACTTGATGAACACGGATTCGGATAAGTTCGATACAATCTTGAATGAACTCAAGAAATTGCATGATCAGGTTCAAAAGCCAAGAGAACAGGTTGCAGATGCTGAGGCACTGCTGGATTTGACACTCACTCTTTTGGGATCTGTGAAGTCTTTGCTTAATGAGGGAATTACCCCTGCTCAATTTGTTGGCTCTTTGCTGAAAGACTACGGCCAAGAGGGTACTGAAAATTCAGTCGACTGGAAAAAGCTTGGGATGGCTGTATCTCCCATCTTTATGAATGTTCATGGCTGTTGTACCATGCTTGGTCCCATGGAAAATGAGTTGAAGCAACCTAAAGTAGGAGTGCAGAGAAGACAAACAAAACCAACTGCTGAGAAGGCGAGGCCTGAAGAGCTTGATGAATCCAATGAAGTGGAAAAGGCTGATACTGACAAAAACATGATAACTATGTTTAATGTCATGAAGAAGAACACAAAAGGTGTTCCACTTGAAAGCCTGATTTTGAACAGGACTTCTTTTGCTCAGACAGTGGAAAATTTGTTTACCCTATCATTTTTAGTTAAAGAGGGCCGTGCTAATATCCGTGTTGATGAAAATCGTTTGCACTATGTTGAACCTAAAAATGCTCCCAAGACGCAAGAAACATACACTCATTTTGTGTTCAGATATGATTACCAAGACTGGAAGTTAATGAAGGATACTGTGCCTGAGGGTAAGGAGTTAATGCCACATAGAGGTCAGTTTTGCACTGTGATAGACTCTCAGCCAGAGATGGGTTGTGACAATTCTCAACCAGCTTTGTCTGTGACACCTATCAGGAAGTTATCACGGAATCGAGGGCGGACTGTGCAGGAGGATGGTGTTGTAGAAGAATCTCCTCAATGTGATGAAGAAAATGTTTCCAGAGCAGTTGCAATCCGTCGGTGTAAACGTAAGCTTCATTAA 1122 0.4269 MKGGSKRKIDGGKEEFRAAKRERLNENAEEEEHEQDPATRRIIRSQFLELKTLINDKRDDLMNTDSDKFDTILNELKKLHDQVQKPREQVADAEALLDLTLTLLGSVKSLLNEGITPAQFVGSLLKDYGQEGTENSVDWKKLGMAVSPIFMNVHGCCTMLGPMENELKQPKVGVQRRQTKPTAEKARPEELDESNEVEKADTDKNMITMFNVMKKNTKGVPLESLILNRTSFAQTVENLFTLSFLVKEGRANIRVDENRLHYVEPKNAPKTQETYTHFVFRYDYQDWKLMKDTVPEGKELMPHRGQFCTVIDSQPEMGCDNSQPALSVTPIRKLSRNRGRTVQEDGVVEESPQCDEENVSRAVAIRRCKRKLH 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0321 373 MobiDBLite consensus disorder prediction 170 197 - -
Lal13g0321 373 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 16 358 - -
Lal13g0321 373 Pfam Nse4 C-terminal 220 299 IPR014854 -
Lal13g0321 373 Coils Coil 16 36 - -
Lal13g0321 373 MobiDBLite consensus disorder prediction 1 38 - -
Lal13g0321 373 MobiDBLite consensus disorder prediction 168 197 - -
Lal13g0321 373 PANTHER UNCHARACTERIZED 16 358 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0321 Lal-Chr13 2016624 2020419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0321 4 372 Non-SMC Element family AT1G51130 47.475 1.57e-108 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0321 K22825 - gmx:100792117 465.692