Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0311 ATGACACGCCCAAACCAAAACGCGTGGCGTAAAATGTCTCGAGTTGAGAAACTCTGGGAGCGGCTAGTTCGTGCTGCATTGAGGAAGGAAAGGACCGGTGGTGATGCATATGAGCACCCTGTTGGTGGAATTGTTGGAAATGTACCAGCCGCACTTTCAAAAAATAGCGATATTGATGAAATTTTAAGAGTCGCAGATGGAATTCAAGATGAGGATCCCAATATCTCTAGGATATTATGTGAGCATGCCTATTCATTATCTCAAAATTTGGACCCTAACAGTGAAGGCCGAGGTGTTTTACAATTCAAGACTGGTCTGCTGTCTGTCATTAAGCAAAAGCTGGCTAAAAGAGAAGTTGGAACCATAGATAGAAGTCAGGATATTGTCCGATTACAAGAGTTCTACAAGCTTTATAGAGACAAGAATAACGCTGACAAATTACGTGAGGAAGAAACAAAGTTGAGGGAATCTGGTGCTTTCACCCGGGAGATTCTTGGCGAGTTAGAGCGCAAGACTGTGCAGAGGAAAAGGGTTTTTGCTACCTTGAAGGTTTTAGGAACAGTGCTTGAGCAGCTGACCAAGGAAATTCCGGACGAGCTCAAGCAGGTAATGGAATCAGATTCTGCATTGACAGAGGACCTGGTTGCTTACAACATTATCCCCCTAGATGCTCCTTCTACAAATGCTATCGTTTTGTTCCCTGAGGTGCAAGCAGCAGTTTCGGCTTTGAAGTATTTTAGCGGCTTACCGGAGTTGCCTACAGGCTATTTCATATCCCATACAAGGAATTGTGACATGCTTGATTTTTTGCAGTATACTTTTGGATTTCAGAAAGATAATGTAGCTAATCAGCGCGAACACATAGTTCACATGCTTGCAAATGAGCAATCTCGGCTTGGAATTCCAGACGAAACCGACCCTAAATTGGATGAAGCAGCTGTGCAGAAAACATTCCTCAAGCCCCTCGAAAATTACATAAAATGGTGTAACTACTTATGCATTCAGCCTGTTTGGAGCAGTTTGGAGGCTGTTAGTAAAGAGAAGAAATTGCTATATGTTTCTTTATATTTCTTAATATGGGGTGAAGCTGCCAATATCAGGTTTCTGCCAGAATGCTTGTGCTACATATTCCATCACATGGCAAGAGAGATGGATGAAATCTTAAGTCAGCAGACTGCACAGCCTGCTAAAAGTTGCACTTCTGAGAATGGGACTGATATATCATTCCTTGATCAAGAAGCTGCGAGCAATGATAATGGGAAGGCACCTCATTCATCCTGGAGAAACTATGATGACTTTAATGAATTTTTCTGGTCACTCCATTGCTTTGAGCTTAGTTGGCCATGGCGCACAAGTTCTTCATTTTTTCATAAGCCACAGCCCAGATCAAAGGGTCTTTCCATTATTGCTTTCAATAATGGAAATCTTAATGCCAAGACTTTGCGGGAGCTTCTTAGTCTTGGTCCGACATTTATTGTTATGAAGTTCGTTGAGAGAACGGCATTACGTTGGACTCGGAATATCAAGCCCTTGGTCAATCCAACAAGGGATATAATAAAAGAGACTGCTATTCGGTACTCTTGGCATGATTTTGTCTCAAAAAATAATCATAATGCCTTGACAGTAGCTAGCTTATGGGGTCCAGTGTTTGCTATTAGGTCACTAAAAGCTCTACGCAGGCTTTTTGAGCAGTTCCCTACAGCTTTTATGGACACCCTGCACATTCCTCTACCCAGCAGGAGCTCCCAACCATCGGCTATTCAGGCTGTGGACAAGAATAAGTTTGATGCTGCTCAGTTCTCGCCCGTTTGGAATGAGATCATAAGAAATCTAAGGGAGGAAGATTATATAACTAACTTTGAACTGGAGTTGCTTTTAATGCCAAGAAATTCTGGGGATCTTCCTTTGGTTCAATGGCCACTATTTCTGCTTGCAAGCAAGATATTTTTAGCTAAAGATATTGCTGCTGAGAGTAGAGATACTCAAGATGAGCTTTGGGATAGGATTTCAAAAGATGAATATATGAAATATGCTGTTCAGGAATGTTACTATGCTATTAAACACATTTTGACAGAAATACTAGATGAAGTGGGAAGGATGGTTGAGAGAATATATGATGATATTAATGCATGCGTTACACAGAAGACTATTCATTTGGATTTCCAACTAAATAAGTTGCCTATTGTAATATCAAGAGTAATTGCGTTGATGGGAATTCTGAAAGAGGCTGAAACACCTGAACTGGAAAGGGTTGCAGTTAGCGCTGTTCAGGATCTTTATGATGTTGTACGATATGATGTTTTTTCTGTAAATATGAGGGAGAATTATGACACATGGAATTTGCTGACCAAAGCTAGGGACGAAGGACATTTGTTCTCAAAGTTGAAATGGCCCAAGAATACAGACTTGAAAGCTCAAGTCAAAAGATTGCATTCACTGTTGACTATCAAAGAGTCTGCCTCGAGTATTCCTAAAAATCTTGAGGCTAGGAGAAGGCTGGAGTTTTTCGCTAATTCACTTTTTATGAAGATGCCTGTTACAAAACCAATTCGAGAGATGTTATCCTTCGGTGTTTTCACTCCTTATTATTCTGAGATTGTGCTTTATAGCATGGCTGAACTCTTAAAGAAAAACGAAGATGGCATATCAATTCTGTTCTACCTTCAGAAGATATATCCAGATGAGTGGAAAAACTTTCTTGCCCGAATCGGCCGTGATGAAAATGCACTTGACACAGATCTTTATGATAGTCCTAGTGATATCCTTGAACTGCGTTTCTGGGCTTCTTATCGGGGGCAAACACTTGCTAGAACAGCACCACAATCTGGATACCATTTGAATAGGATGGACCAGGCCCAAGCAAGGAGTCTTCAGGAAATTGTGGAGATGGATATGAAGAAGGCCTGCGATGATTGGAAGAATAATGACCAGAATAAAAGTCCCCATGGAAATTTGGAAGAAAATGGGCTAGATACTGTTGCTGAGACCCATTGA 2994 0.4108 MTRPNQNAWRKMSRVEKLWERLVRAALRKERTGGDAYEHPVGGIVGNVPAALSKNSDIDEILRVADGIQDEDPNISRILCEHAYSLSQNLDPNSEGRGVLQFKTGLLSVIKQKLAKREVGTIDRSQDIVRLQEFYKLYRDKNNADKLREEETKLRESGAFTREILGELERKTVQRKRVFATLKVLGTVLEQLTKEIPDELKQVMESDSALTEDLVAYNIIPLDAPSTNAIVLFPEVQAAVSALKYFSGLPELPTGYFISHTRNCDMLDFLQYTFGFQKDNVANQREHIVHMLANEQSRLGIPDETDPKLDEAAVQKTFLKPLENYIKWCNYLCIQPVWSSLEAVSKEKKLLYVSLYFLIWGEAANIRFLPECLCYIFHHMAREMDEILSQQTAQPAKSCTSENGTDISFLDQEAASNDNGKAPHSSWRNYDDFNEFFWSLHCFELSWPWRTSSSFFHKPQPRSKGLSIIAFNNGNLNAKTLRELLSLGPTFIVMKFVERTALRWTRNIKPLVNPTRDIIKETAIRYSWHDFVSKNNHNALTVASLWGPVFAIRSLKALRRLFEQFPTAFMDTLHIPLPSRSSQPSAIQAVDKNKFDAAQFSPVWNEIIRNLREEDYITNFELELLLMPRNSGDLPLVQWPLFLLASKIFLAKDIAAESRDTQDELWDRISKDEYMKYAVQECYYAIKHILTEILDEVGRMVERIYDDINACVTQKTIHLDFQLNKLPIVISRVIALMGILKEAETPELERVAVSAVQDLYDVVRYDVFSVNMRENYDTWNLLTKARDEGHLFSKLKWPKNTDLKAQVKRLHSLLTIKESASSIPKNLEARRRLEFFANSLFMKMPVTKPIREMLSFGVFTPYYSEIVLYSMAELLKKNEDGISILFYLQKIYPDEWKNFLARIGRDENALDTDLYDSPSDILELRFWASYRGQTLARTAPQSGYHLNRMDQAQARSLQEIVEMDMKKACDDWKNNDQNKSPHGNLEENGLDTVAETH 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0311 997 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 349 447 IPR026899 -
Lal13g0311 997 Pfam 1,3-beta-glucan synthase component 823 939 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Lal13g0311 997 MobiDBLite consensus disorder prediction 971 997 - -
Lal13g0311 997 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 12 463 - -
Lal13g0311 997 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 463 498 - -
Lal13g0311 997 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 552 943 - -
Lal13g0311 997 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 506 552 - -
Lal13g0311 997 PANTHER BNAC03G35120D PROTEIN 552 943 - -
Lal13g0311 997 PANTHER BNAC03G35120D PROTEIN 463 498 - -
Lal13g0311 997 PANTHER BNAC03G35120D PROTEIN 12 463 - -
Lal13g0311 997 PANTHER BNAC03G35120D PROTEIN 506 552 - -
Lal13g0311 997 SMART FKS1_dom1_2 347 450 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0311 Lal-Chr13 1911766 1954192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0311 508 971 Cell Wall Biosynthesis AT3G07160 61.818 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0311 K11000 - ccaj:109815119 800.816