Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0305 ATGCTATCAGCTATATTAAGGCGAATTATGTCACCCTGTTGGAGTCCATTTGATGCGGGTGAAAGTTCAAGTAGAAATGTAGAATCTAGTGGTCGTTTCGTTGGTTTATTGTGGCATAAAGATTCGGGAAGACACCTGAATGGTGAATTCTCAATGGCAGTGGTTCAAGCAAACAATTTGTTGGAGGATCATAGCCAACTTGAATCAGGCCCCTTGAGCTCCGTTGCAGCAAGTCCTCAAGGAACTTATGTCGGTATATATGACGGGCATGGCGGTCCAGAAGCTGCGCGGTTTGTCAATGACCACCTATTTAAAAATATAAAGAAATTTACTTCAGAAAATCAAGGAATGTCAGCTGACGTTATCACTAAAGCATTCTTGGCAACAGAAGAAGAGTTCCTCTCTGTAGTAAAGAAGCAGTGGGTACAGAAGCCACAAATAGCATCGGTTGGAGCTTGCGTTCTGGTAGGCGTAATATGTTGCGGGCATCTCTATATTGCGAACGCAGGAGACTCTCGAGCAGTGTTAGGTAGACGGGATATTGCCACAAAAGAGATTACAGCTGTTCAGTTATCCTATGAGCACAATGCTAGCTTGGAATCTGTCAGAGATGAGTTGCGCTCGTTACACCCTGATGATCCGCATATTGTAGTTATGAAGCACAAGGTCTGGCGTGTGAAGGGACTGATCCAGATTTCAAGATCCATTGGTGATGCCTATCTAAAGAAGGCAGAGTTTAACACAGCACCACTTTTGCCAAAATTTAGACTCTCAGAATCCTTTGAGCAACCAATCCTTAAAGCTGAACCAACAATACTCGAACAGAAACTTCACCCCGAAGACCAGTTTCTTATATTTGCATCAGATGGATTATGGGAGCACATCAGCAATGAAAAAGCAGTCGACATTGTGCACAACAGTCCTCGTAATGGAGTCGCGAAGAAACTTATCAAAACTGCACTTTGTGAAGCTGCAAAGAAGAGAGAAATGAGATACTCAGACTTGAAAAAGATCGATAGAGGGGTGAGAAGACATTTCCATGATGACATCACAGTTATAGTCTTGTTTCTGAATTCCCATATGATTAGTCGTTGTATTTTACGAGGGCCTATTGTTTCTATCAAAGGAGCAGGAGGTGGTGGTGTCGGTATTGGTGTTGTAGCCTAG 1167 0.4302 MLSAILRRIMSPCWSPFDAGESSSRNVESSGRFVGLLWHKDSGRHLNGEFSMAVVQANNLLEDHSQLESGPLSSVAASPQGTYVGIYDGHGGPEAARFVNDHLFKNIKKFTSENQGMSADVITKAFLATEEEFLSVVKKQWVQKPQIASVGACVLVGVICCGHLYIANAGDSRAVLGRRDIATKEITAVQLSYEHNASLESVRDELRSLHPDDPHIVVMKHKVWRVKGLIQISRSIGDAYLKKAEFNTAPLLPKFRLSESFEQPILKAEPTILEQKLHPEDQFLIFASDGLWEHISNEKAVDIVHNSPRNGVAKKLIKTALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVLFLNSHMISRCILRGPIVSIKGAGGGGVGIGVVA 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0305 388 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Lal13g0305 388 SMART PP2C_4 39 355 IPR001932 -
Lal13g0305 388 SUPERFAMILY PP2C-like 77 359 IPR036457 -
Lal13g0305 388 ProSiteProfiles PPM-type phosphatase domain profile. 49 357 IPR001932 -
Lal13g0305 388 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 379 - -
Lal13g0305 388 PANTHER ALPHABET, ISOFORM E-RELATED 8 379 - -
Lal13g0305 388 Gene3D - 36 365 IPR036457 -
Lal13g0305 388 CDD PP2Cc 78 357 IPR001932 -
Lal13g0305 388 Pfam Protein phosphatase 2C 76 327 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0305 Lal-Chr13 1878306 1882608 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0305 3 378 PP2C-type Phosphatase Gene Family AT3G12620 72.944 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0305 K01102 - pop:7458624 586.26