Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0303 ATGCCTCCGAAGCTTCGTAGTGGAGTGCGGCGCGGTCGTGCTGCGGTAGCAAAGGAAGGTTTGGAACCGCCGAAAAGGAACACAGCGAAGAACGCTAAGAAGAAGAAAGAAGAGGTTGTACCCGTAGCCGTTAACGTGAACGTGAACGCGATGGCTGATGCTAGTGGTGGATTAAGTGCTAATAAGGGTGTTGCTCCAGAGGATCCAGTTTTCCCTGAAAAGGTTCAAGTAGGAGGATCACCTATGTATAAGGTCGAGAGGAAACTCGGTAAAGGTGGTTTTGGTCAGGTTTTTGTTGGCCGTCGTGAGCGGGCAGGTCCTGGAGCTGTCGAGGTGGCTCTGAAATTTGAACACAGAAACAGTAAAGGATGTAACTATGGCCCTCCTTATGAGTGGCAAGTGTATAACACCCTTGGTGGCAGTCATGGAATACCAAAAGTACACTACAAAGGAAGGCAAGGAGAATATTATGTGATGGTTATGGATATGCTTGGACCAAGTTTGTGGGATGTCTGGAATTCCTCAAGCCAGACGATGTCTAGTGAAATGGTCTCATGTATAGCTGTTGAGTCCTTGTCGATACTGGAAAAGATGCACTCCAGGGGTTATGTGCATGGAGATGTAAAACCAGAGAACTTTTTATTAGGTCAGCCAGCTACAGCACAAGAGAAGAAACTGTTTCTTGTTGACCTTGGATTAGCAACTAAATGGAGAGACACTTCCAGTGGCCAGCATGTTGAATATGATCAACGCCCTGATATGTTTAGAGGGACAGTTCGATATGCTAGTGTTCATGCTCATTTGGGAAGAACTGCTAGTAGAAGGGATGATCTCGAATCTCTTGCATACACACTTATTTTCCTTCACAAAGGCCGATTACCGTGGCAAGGTTATCAGGGTGATACCAAATCCTTCCTTGTTTGCAAAAAGAAGATGGGGACATCTCCTGAGATGCTATGCTGCTTTTGCCCTTCTCCTTTCAGACAGTTTCTTGAGGCTGTGGTGAGCATGAAATTTGATGAAGAACCTAACTATGGCAAGTTAATTTCTTTGTTTGATGGTATAGTTGGACCTCCAGCACTGCAGCCAGTTAATACTGACGGTGCTCAAAAGGTTGGGCAAAAGCGGAGTAGATTGAATATTGAGGAAGATGATGATTCACAGCCCAAAAAGAAGGTCCGTTTAGGGGTTCCTGCTATGCAATGGATTTCAATTTACAATGCAAGACTACCAATGAAACAAAGGTATCATTACAATGTGGCCGATACAAGATTAGCACAACATATTGAGAAAGGGATTGCTGATGGTCTTCTTATTAGTTGTGTGTCTTCCTGTTCCAATCTTTGGGCACTTATTATGGACGCTGGAACTGGTTTTACACATCAACTTTACAAGTGGACGCCTGTTTTCTTACACAAGGAATGGATCATGGAGCAGTGGGATAAGAGTTATTACATTACTTCTATTGCAGGGTCTGTTAATGGTGCCTCTCTTGTGGTGATGTCAAAAGGTTTGAATGCTAACAAAGTTGATTTCTATGATGATGAATTTTTCCTGGATGCTGAATCATATCACGAGAAAGTCTTTCAGGATTTTTTAAGGTGGCTTCCACCATTCAACCCTTCACGCCCTCCACAGCCATGTCTCCTTGACAGGTCTAGTAGGGGGATTCTGGGTTTTACCCAAAAACCTAAGCATTCCCCTTTCTCTGGATTCTCAGTCACAATATTTGGCCCGTCTCTTTCAGTTCTCATTCTATCATTCCATGCCTTCTCGCGTCATCACTCAGCCTCTGGAGTCTCTCTTTCTCCATCTCCGATGACCATCCAACTCTGGCAACCACCTCTGTTAGCGCAATTCTCATTTGCTGAAATTAGCACGCAGTATACCCAACAATCATACAAAGTGAGTGATTCTTTCCCCTTCAAATGGATAAACAAGAAGTGGAAAGAAGGTTTTCATGTCACCTCAATGGCTACTGCTGGAAGTCGCTGGGGTGTTGTCATGTCTCGCAATGCTGGATTCAGTGATCAGGTGGTTGAACTTGATTTTCTGTATCCAAGTGAGGGCATTCATAGACGTTGGGATAATGGTTATAGGATTACAGCAACTGCTGCCACAACGGATCAATCTGCTCTTATATTAAGTATTCCGAGGCGTAGGCCTGGGGATGAAACTCAGGAAACTCTCCGTACATCTCAATTTCCGAGCACACATGTTAAGGTAAGGGAATGTGAGATAAATGGTCAAAAAATCTATATTTGGCCTGTTTGTGCTATGGGCGCACAGTATGCTGATTTCCTTCATAGGCAAATGAATTATGGAATTTCTGCTACCCAATCTTTTTGTAGGAGCAAGCTTTGTCAGCAGAGGGCCATATTGTTCTGTCATATAGATTATTGTCCTCTTCTCCCTGCTTCTTATATTAAGTAA 2433 0.4377 MPPKLRSGVRRGRAAVAKEGLEPPKRNTAKNAKKKKEEVVPVAVNVNVNAMADASGGLSANKGVAPEDPVFPEKVQVGGSPMYKVERKLGKGGFGQVFVGRRERAGPGAVEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDMLGPSLWDVWNSSSQTMSSEMVSCIAVESLSILEKMHSRGYVHGDVKPENFLLGQPATAQEKKLFLVDLGLATKWRDTSSGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDTKSFLVCKKKMGTSPEMLCCFCPSPFRQFLEAVVSMKFDEEPNYGKLISLFDGIVGPPALQPVNTDGAQKVGQKRSRLNIEEDDDSQPKKKVRLGVPAMQWISIYNARLPMKQRYHYNVADTRLAQHIEKGIADGLLISCVSSCSNLWALIMDAGTGFTHQLYKWTPVFLHKEWIMEQWDKSYYITSIAGSVNGASLVVMSKGLNANKVDFYDDEFFLDAESYHEKVFQDFLRWLPPFNPSRPPQPCLLDRSSRGILGFTQKPKHSPFSGFSVTIFGPSLSVLILSFHAFSRHHSASGVSLSPSPMTIQLWQPPLLAQFSFAEISTQYTQQSYKVSDSFPFKWINKKWKEGFHVTSMATAGSRWGVVMSRNAGFSDQVVELDFLYPSEGIHRRWDNGYRITATAATTDQSALILSIPRRRPGDETQETLRTSQFPSTHVKVRECEINGQKIYIWPVCAMGAQYADFLHRQMNYGISATQSFCRSKLCQQRAILFCHIDYCPLLPASYIK 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0303 810 Pfam Protein kinase domain 83 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0303 810 MobiDBLite consensus disorder prediction 1 37 - -
Lal13g0303 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Lal13g0303 810 PANTHER CASEIN KINASE I-LIKE PROTEIN 62 503 - -
Lal13g0303 810 PANTHER CASEIN KINASE I-LIKE PROTEIN 625 734 - -
Lal13g0303 810 SUPERFAMILY Protein kinase-like (PK-like) 83 355 IPR011009 -
Lal13g0303 810 MobiDBLite consensus disorder prediction 364 390 - -
Lal13g0303 810 PANTHER CASEIN KINASE-RELATED 625 734 - -
Lal13g0303 810 PANTHER CASEIN KINASE-RELATED 62 503 - -
Lal13g0303 810 SMART serkin_6 83 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0303 810 Gene3D Transferase(Phosphotransferase) domain 1 60 396 - -
Lal13g0303 810 ProSiteProfiles Protein kinase domain profile. 83 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0303 810 CDD STKc_CK1 82 352 - -
Lal13g0303 810 ProSitePatterns Protein kinases ATP-binding region signature. 89 115 IPR017441 GO:0005524
Lal13g0303 810 MobiDBLite consensus disorder prediction 376 390 - -
Lal13g0303 810 MobiDBLite consensus disorder prediction 12 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0303 Lal-Chr13 1866549 1871465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0303 7 233 AGC Kinase Gene Family AT1G03920 24.583 6.27e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lal13g0303 Pkinase 2.6e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0303 - - lang:109336071 970.689