Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0291 ATGGGATCGAGAGGGATCTTTGGGTGGTCCCCACCTCATGTACAACCTCTCACCCCAGTTTCCGAGGTATCTGAGCCACCTGAGTCGCCGTACGTGGACCCTGGCGCTGAGACCTCCACCTCTCTCCAGGTGGAGCTAGAGGAGGAGATGGAGGAGCCGGAGGACATCGAGCCACCTCCCGCTGCTGTTTCTTTCTCCGGTCTCTTCGCCTGTGCTGACTGCTTTGACTGGTTTCTGATGGTTGTTGGTTCGATCGCAGCTGCCGCTCACGGTGCCGCGCTGATCGTTTACTTGCACTACTTTGCTAAGGTTATTCATCATATGCATCCTCAGCAAGGTTCTTCAGGATCTGAGGAGCAGTTTCACAAGTTAAAGGAGCTTGCTTTAACCATTGTTTATATTGCTGGGGGAGTTTTTGCTGCTGGTTGGATTGAGGTTTCATGTTGGATTCTGACCGGAGAACGGCAGACTGCTGTCATCAGGTCAAAATATGTTCAAGTATTACTTAACCAAGATATGAGTTTTTTTGATACTTATGGGAATAATGGAGACATTGTGAGTCAAGTATTGAGTGATGTGCTGCTCATTCAATCTGCTCTTAGTGAAAAAGTTGGGAATTATATACATAATATGGCTACATTCTTCAGTGGTCTTGTTATTGGTTTTATCAATTGCTGGCAGATTGCGTTGATAACATTAGCCACTGGTCCATTTATCGTTGCCGCTGGTGGGATATCAAATATATTCCTCCATAAGCTTGCTGAGAATATTCAAGATGCGTATGCCGAAGCTGCCAGCATTGCCGAGCAGGCTGTTTCCCATATAAGAACCTTGTATGCATTTACAAATGAAACATTGGCTAAATATTCATATGCAACGTCACTCCAAGCTACACTTAAATATGGTATTTTAATAAGTCTTGTACAAGGTCTTGGTCTTGGATTTACATATGGGCTTGCAATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGGTTCTTGGTTGTGCATGGAAAAGCTAATGGCGGTGAGATTGTTACAGCTCTCTTTGCTGTGATTCTAAGTGGCCTGGGATTGAATCAAGCAGCAACAAATTTCTACTCTTTTGACCAAGGTCGAATAGCTGCTTATAGACTATTTGAGATGATAAGCCGGTCATCCTCGTCTTTCAATCATGATTGTGAAGCTCATAGTTCTCTTCAAGGGAATATAGAGTTTCGGAATGTTTACTTCAGTTATCTTTCCCGTCCTGAAATCCCTATTTTGAGTGGGTTTTATCTCACTGTTCCTGCTAAGAAAGCTGTGGCACTTGTTGGCAAAAATGGTTCTGGAAAAAGTAGTATTATTCCACTCATGGAGCGGTTCTATGATCCTACATTGGGAGAAGTTCTTTTAGATGGTGAAAACATCAAGAATTTTAAACTGGAGTGGCTGAGGAGCCAAATTGGACTAGTGACCCAGGAGCCTGCTTTGCTCAGTTTGAGTATCAGGGACAATATTGCTTATGGGAGGGATGTTACCATGGACCAAATTGTAGAGGCTGCCAAAATAGCTCATGCACATACTTTTATCAGTTTGTTGGATAAGGATTATGACACACAGGTTGGCAGGGCTGGCTTAGCTTTGACAGAAAAGCAGAAAGTAAAACTTTCTATTGCGAGAGCTGTGCTTTTAAATCCATCTATCCTCCTGCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGTCTGTTCAGGAGGCTCTGGATCTCCTTATGTTAGGACGCTCAACAATAATAATTGCCAGAAGGCTTAGTCTTATACGGAATGCTGATTATATAGCTGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCATGATGAATTATTGGCCCTGGATGGCTTATATGCAGAGCTTCTTCGACGTGAAGAGGCCGCAAAGCTTCCCAAAAGAATGCCTGTTCGAAACTACAAGGACACTGCAGCTTTTCAAATTGAGAAAGAATCTTCAGAAAGTCAGAGCCTCAAAGAGTCATCATCCCCTAAAATGATGAAATCACCCTCTCTTCAAAAACTTTCTGCCGTATTTCGGCCTTCAGATGGATTCTTTAATTCACAAGAATCACCAAATGTTCGGAGCCCGCCTCCTGAGAAGATGCCGGAAAATTGTCAGTCTTTGGATGCAGCAGATAAGGAGCCATCAATAAGAAGGCAGGATAGTTTTGAAATGAGACTACCCGAGTTACCAAAGATTGATGTTGAATCTATATATCGACAAACATCAAAAGGTTCTGACCCTGAATCCCCTGTTTCACCTCTTTTAACATCTGATCCTCAAAATGAACGTTCTCATTCACAAACTTTTAGTAGACCAGATAGTGGCTCTGATGATGTTTCAGTGAAAATGAGAGAAACAAACGGTGCACAGCTTCGAAAACAACCCTCAATTTGGAGGTTGGCAGAGCTTAGTCTTGCAGAGTGGTTTTATGCTGTGTTAGGAAGCATAGGTGCTGCTGTCTTTGGTTCTTTCAATCCCCTGCTTGCTTATGTTGTTGGCTTGGTAGTGACAACTTACTATAGCATTGAGGGAGGTCGTCACTTTAGAGGGGAGGTGGACAAGTTGTGTTTGATCATTGCTTGCATGGGCATTGTGACAGTTGTTGCCAACTTTTTGCAGCATTTCTACTTCGGTATTATGGGGGAGAAAATGACAGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAACTGGCTGGTTTGATGAAGAAGAAAACAGTGCTGACAATTTATCAATTCGCTTGGCCAATGATGCTACATTTGTGAGAGCTGCTTTTAGTAACCGGCTTTCCATATTTATACAGGATACTGCTGCAGTTATTGTTGCTATTCTGATTGGTGTTTTGCTGCACTGGCGAATAGCACTTGTGGCTTTGGCAACACTTCCAATCCTCTGTGTTTGTGCGATTGCCCAGAAACTGTGGCTTGCTGGATTTTCGAGAGGCATACAGGAAATGCACAGGAAGGCATCTCTGGTTCTTGAAGACGCAGTCAGAAATATTTACACTGTTGTTGCATATTGTGCTGGTAATAAGGTGATGGAGCTCTACAGGCTGCAGCTAAATAAAATACTTAGGCAGAGTTTTTTTCATGGTGTTGCCATCGGTTTTGGATTCGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTTCTACTTTGGTACACTGCAATATGTATAAAAAATAGGTATGTAGGTCCAACTACTGCACTGAAGGAGTACATGGTTTTCTCGTTTGCTACATTTGCACTTGTGGAGCCTTTTGGGTTGGCTCCTTACATACTTAAGCGGCGTAAATCTCTCATTTCAGTGTTTGAAATTATAGACCGCGTGCCTAAAATTGATCCTGATGATAACTCAGCGTTGAAGCCGCCCAATGTATATGGAAGCATTGAGTTGAAAAACGTTGATTTTTGTTATCCTTCTCGTCCTGAAATGTTGGTGCTCAGCAATTTTACTCTGAAAGTCAGTGGAGGACAAACAGTTGCGGTTGTGGGAGTTTCAGGGTCAGGAAAGAGCGCTATAATATCTTTGATTGAGAGATTTTATGATCCAGTTGCTGGCCAAGTTTTACTAGATGGGAGGGACTTAAAGCTATATAATTTAAGATGGTTAAGGAGCCACCTTGGTCTGGTTCAGCAGGAACCTATTATCTTCTCGACAACCATAAGGGAAAATATCATATATGCCAGGCATAATGCCAGTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCAAATGCACATCATTTCATTAGCAGCTTGCCTCATGGTTATGATACTCATGTTGGGATGAGAGGTGTTGATTTAACTCCGGGACAGAAACAGAGGATTGCAATTGCGAGGGTAGTGCTGAAAAATGCACCTATCTTGTTGTTGGATGAAGCTAGTTCAGCAATTGAATCTGAGTCAAGCCGAGTGGTGCAAGAGGCTCTAGACACACTAATAATGGGAAATAAGACCACTATTTTGATAGCACATAGAGCTGCAATGATGCGGAATGTGGACAACATAGTAGTTCTTAATGGAGGACGGATAGTGGAGGAGGGGACCCATGATTCATTGGCGGCGAAGAATGGTCTGTATGTCCGATTGATGCAACCGCATTTTGGTAAGGCTTTGCGTCATCATCGGCTTGTTTAG 4203 0.429 MGSRGIFGWSPPHVQPLTPVSEVSEPPESPYVDPGAETSTSLQVELEEEMEEPEDIEPPPAAVSFSGLFACADCFDWFLMVVGSIAAAAHGAALIVYLHYFAKVIHHMHPQQGSSGSEEQFHKLKELALTIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFINCWQIALITLATGPFIVAAGGISNIFLHKLAENIQDAYAEAASIAEQAVSHIRTLYAFTNETLAKYSYATSLQATLKYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVVHGKANGGEIVTALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSFNHDCEAHSSLQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGKNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNFKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDVTMDQIVEAAKIAHAHTFISLLDKDYDTQVGRAGLALTEKQKVKLSIARAVLLNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLALDGLYAELLRREEAAKLPKRMPVRNYKDTAAFQIEKESSESQSLKESSSPKMMKSPSLQKLSAVFRPSDGFFNSQESPNVRSPPPEKMPENCQSLDAADKEPSIRRQDSFEMRLPELPKIDVESIYRQTSKGSDPESPVSPLLTSDPQNERSHSQTFSRPDSGSDDVSVKMRETNGAQLRKQPSIWRLAELSLAEWFYAVLGSIGAAVFGSFNPLLAYVVGLVVTTYYSIEGGRHFRGEVDKLCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNETGWFDEEENSADNLSIRLANDATFVRAAFSNRLSIFIQDTAAVIVAILIGVLLHWRIALVALATLPILCVCAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAYCAGNKVMELYRLQLNKILRQSFFHGVAIGFGFGFSQFLLFACNALLLWYTAICIKNRYVGPTTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDNSALKPPNVYGSIELKNVDFCYPSRPEMLVLSNFTLKVSGGQTVAVVGVSGSGKSAIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSAIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRNVDNIVVLNGGRIVEEGTHDSLAAKNGLYVRLMQPHFGKALRHHRLV 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0291 1400 Coils Coil 250 270 - -
Lal13g0291 1400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1140 1387 IPR027417 -
Lal13g0291 1400 CDD ABC_6TM_Pgp_ABCB1_D2_like 819 1134 - -
Lal13g0291 1400 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1151 1388 IPR003439 GO:0005524
Lal13g0291 1400 SMART AAA_5 431 610 IPR003593 -
Lal13g0291 1400 SMART AAA_5 1178 1365 IPR003593 -
Lal13g0291 1400 CDD ABC_6TM_Pgp_ABCB1_D1_like 111 379 - -
Lal13g0291 1400 Gene3D ABC transporter type 1, transmembrane domain 129 679 IPR036640 GO:0005524|GO:0016021
Lal13g0291 1400 Gene3D ABC transporter type 1, transmembrane domain 770 1000 IPR036640 GO:0005524|GO:0016021
Lal13g0291 1400 Gene3D ABC transporter type 1, transmembrane domain 1004 1148 IPR036640 GO:0005524|GO:0016021
Lal13g0291 1400 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 22 1396 - -
Lal13g0291 1400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 638 IPR027417 -
Lal13g0291 1400 PANTHER ABC TRANSPORTER B FAMILY 22 1396 - -
Lal13g0291 1400 Pfam ABC transporter 1169 1317 IPR003439 GO:0005524
Lal13g0291 1400 Pfam ABC transporter 425 569 IPR003439 GO:0005524
Lal13g0291 1400 Gene3D - 1149 1388 IPR027417 -
Lal13g0291 1400 Gene3D - 402 653 IPR027417 -
Lal13g0291 1400 MobiDBLite consensus disorder prediction 1 58 - -
Lal13g0291 1400 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 828 1075 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal13g0291 1400 MobiDBLite consensus disorder prediction 755 796 - -
Lal13g0291 1400 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 404 639 IPR003439 GO:0005524
Lal13g0291 1400 MobiDBLite consensus disorder prediction 727 741 - -
Lal13g0291 1400 MobiDBLite consensus disorder prediction 660 741 - -
Lal13g0291 1400 Pfam ABC transporter transmembrane region 833 1083 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal13g0291 1400 Pfam ABC transporter transmembrane region 82 354 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal13g0291 1400 SUPERFAMILY ABC transporter transmembrane region 68 379 IPR036640 GO:0005524|GO:0016021
Lal13g0291 1400 SUPERFAMILY ABC transporter transmembrane region 815 1136 IPR036640 GO:0005524|GO:0016021
Lal13g0291 1400 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 81 371 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0291 Lal-Chr13 1797276 1806967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0291 50 697 Calmodulin-binding Proteins AT2G36910 43.511 1.11e-164 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0291 K05658 - gmx:100799399 2363.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0291 13 1797276 1806967 Lal13g0291 13 1797276 1806967 ECH