Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0280 ATGGCTGCAAGTTCTGCCTCGGTTTCTTTTCCTAGCTTCAAGCTCAAGTATTTGTTGATTTTTACATGTCTTATAGGAATAGTTTCAGCTCATTTATCTACTAAATTCTATGATAAGACTTGCCCAAAAGCTGTTAAAACCATTACAAAAGCAGTGGATGAAGCTGTGTCCACTGAGCCTCGAATGGTGTTGTTAGATGACACAGAAAATTTCACTGGTGAGAAGAATTCTTTCCCAAATGCTAACTCCCTTAGGGGGTTTGAAGTCATAGACAACATAAAATCTACATTGGAAAAGTTGTGCCCTGCAACTGTCTCTTGTGCTGATATCCTAGCCGTTGCTGCAAGCGAATCTGTTGGTGCTCTTGGTGGACAAAGATGGAACGTACCATTAGGCAGAAGAGACTCAATTACTGCAAGTTTAAGTGAATCTAATTCAGATTTACCTGCTCCCTTTCTTGATCTTAATGGCCTTATCACTGCTTTCGCCAAGAAAAATTTCACAACCCAAGAAATGGTTATTTTATCAGGAGCTCACACGATAGGGCAAGCGAGGTGCACATTTTTCAGAGGTAGGATTTATAATGAGAGCAACATAGATTCTTCATATGCAGCAGCAATGCAAGCAGCATGTCCCTTTGAAGGTGGTGATGGAAATTTGTCTCCTTTTGATACCAAAACTTCAGCCACTTTTGACAATGCTTACTATCAGAACTTGGTGAACTTAAAGGGTCTTCTACACTCTGACCAACAACTCTTTGTGAATGGATCAGGAATCACAGATAGTCAAGGATGTGATGCATCAGTGTTGTTAGACGATACACCAAATTTCACTGGTGAGAAGAATTCTTTCCCCAATGCTAACTCACTTAGGGGTTTTGAGGTGATAGACAACATAAAATCTCAATTGGAGGAGTTATGCCCTGGCGTTGTTTCTTGTGCTGATATTCTAGCTGTTGCTGCAAGCGAAGCTGTTGGTATTCTTGGTGGACAAAGATGGAATGTACCATTAGGTAGAAGAGACTCAACAAGTGCAAGTTTAAGTGAAGCTAATTCTGACATACCTGCTCCCTTTTTGGATCTTAATGGCCTTATCTCTACTTTCTCCAACAAAGGCTTCACAGTTCAAGAAATGGTTACTTTATCAGGAGCTCACACAATAGGCCTAGTACGTTGCAGATTTTTCAGAGATAGGATTTATAACGAGACCAACATAGATCCATCCTTTTCAGCAGCAATGAAAGAAGAGTGTCCCTTTGATGATGGTGATGATAATTTGTCTCCCTTTGATTCAAAAACTCCAATGTATTTTGACAATGCTTACTACCGTAACTTGATTGAGTCAAAGGGTCTTGTACACTCAGACCAACAACTCTTTGTTGATGGATCAGGACTCACTAAGCGTCAAGTAATTGCATATAGCAAAAATTTCGGACGTTTCAAACATGATTTTGCAAATGCAATGTTTAAGATGAGCCAGCTTAGCCCATTAACTGGATCTGATGGTCAAATCAGGAATAACTGTCATTTCATCAATCCAACAACAGATGAATAG 1554 0.3977 MAASSASVSFPSFKLKYLLIFTCLIGIVSAHLSTKFYDKTCPKAVKTITKAVDEAVSTEPRMVLLDDTENFTGEKNSFPNANSLRGFEVIDNIKSTLEKLCPATVSCADILAVAASESVGALGGQRWNVPLGRRDSITASLSESNSDLPAPFLDLNGLITAFAKKNFTTQEMVILSGAHTIGQARCTFFRGRIYNESNIDSSYAAAMQAACPFEGGDGNLSPFDTKTSATFDNAYYQNLVNLKGLLHSDQQLFVNGSGITDSQGCDASVLLDDTPNFTGEKNSFPNANSLRGFEVIDNIKSQLEELCPGVVSCADILAVAASEAVGILGGQRWNVPLGRRDSTSASLSEANSDIPAPFLDLNGLISTFSNKGFTVQEMVTLSGAHTIGLVRCRFFRDRIYNETNIDPSFSAAMKEECPFDDGDDNLSPFDSKTPMYFDNAYYRNLIESKGLVHSDQQLFVDGSGLTKRQVIAYSKNFGRFKHDFANAMFKMSQLSPLTGSDGQIRNNCHFINPTTDE 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0280 517 Gene3D - 32 151 - -
Lal13g0280 517 Pfam Peroxidase 71 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0280 517 Pfam Peroxidase 263 463 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0280 517 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0280 517 PRINTS Plant peroxidase signature 170 182 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0280 517 PRINTS Plant peroxidase signature 222 237 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0280 517 PRINTS Plant peroxidase signature 238 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0280 517 SUPERFAMILY Heme-dependent peroxidases 32 256 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal13g0280 517 Gene3D - 263 508 - -
Lal13g0280 517 SUPERFAMILY Heme-dependent peroxidases 263 512 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal13g0280 517 CDD secretory_peroxidase 263 511 IPR033905 GO:0004601|GO:0042744
Lal13g0280 517 ProSiteProfiles Plant heme peroxidase family profile. 263 512 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0280 517 CDD secretory_peroxidase 31 257 IPR033905 GO:0004601|GO:0042744
Lal13g0280 517 ProSitePatterns Peroxidases proximal heme-ligand signature. 377 387 IPR019793 -
Lal13g0280 517 PANTHER PEROXIDASE 4 62 - -
Lal13g0280 517 PANTHER PEROXIDASE 263 514 - -
Lal13g0280 517 PANTHER PEROXIDASE 63 259 - -
Lal13g0280 517 Gene3D Peroxidase, domain 2 355 491 - -
Lal13g0280 517 Gene3D Peroxidase, domain 2 152 261 - -
Lal13g0280 517 ProSiteProfiles Plant heme peroxidase family profile. 31 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0280 517 PANTHER PEROXIDASE 72-RELATED 63 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0280 517 PANTHER PEROXIDASE 72-RELATED 263 514 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0280 517 PANTHER PEROXIDASE 72-RELATED 4 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0280 517 PRINTS Haem peroxidase superfamily signature 105 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0280 517 PRINTS Haem peroxidase superfamily signature 123 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0280 517 PRINTS Haem peroxidase superfamily signature 171 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0280 517 PRINTS Haem peroxidase superfamily signature 430 445 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0280 Lal-Chr13 1748141 1752932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0280 264 512 Peroxidase AT5G05340 56.175 7.84e-91 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0280 K00430 - gmx:100802244 385.185