Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0277 ATGGAACTCCACGAAGTCACGCGCCGCCCTGCTTCCAATGAGTCTCTGACTCTCGGGCAACACCTCAAGCACGTTGGAGACGTGCAAAAAGATGCCTCCGGCGATGGTAGTGAGACTCCGGTGCACCATGCACTAGACATCTCTGATTGTGGCGTTGGAAATGAACCTCGTGCGGTTCCATTCGTTCTTTCCTTCGGCAACCTCACGTACAGCGTCAAGATTCCATGGAAATTGAGTTTTCCTGCATTGTTTCCAAATCGACGAAGCCAACTTGGTGCAGCAGCGGTGGCGGTGGAGCCCATTGTCGGAGAGAATATGTTCACACGGACCAAGACTTTGTTAAATGATATCTCCGGTGAAGCACGTGATGGCGAGATCATGGCGGTGCTCGGTGCTAGTGGTTCCGGAAAATCAACACTTATCGACGCGCTGGCGAATAGAATCGCGAAGGGAAAGCTCAAAGGAACCGTAGCGCTGAACGGCGAAGCATTGGGATCGCGGCTTTTGAAGGTGATCTCCGCGTACGTAATGCAAGACGATCTTCTCTTTCCAATGCTCACCGTCGAAGAAACCCTCACCTTCGCCGCCGAATTCCGCTTACCACGTAGTCTCTCAAAATCAAAGAAAAAGGCGCGTGTTCAAGCCCTAATCGACCAGCTAGGACTCCGAAACGCCGCCAAAACCATAATCGGAGACGAAGGCCACCGTGGAGTCTCCGGCGGTGAACGGCGTAGAGTCTCAATCGGAATCGACATCATCCACGATCCTATCCTCCTTTTCTTAGACGAACCAACCTCTGGACTCGACTCCACAAGCGCGTTCATGGTGGTGAAGGTTCTTCAAAGAATCGCACAAAGTGGAAGCATTGTTATCATGTCAGTTCACCAACCAAGTTACCGAATCCTTAGCCTTCTTGATCGCATGATCTTCTTATCTCGCGGCCAAACCGTTTACAGCGGTTCGCCGTCGCAGTTACCGTCATTCTTCGCCGAGTTCGGTCACCCAATACCCGATACTGATAACCGAACCGAGTTCGCGTTGGACCTAATACGCGACCTAGAAGGTTCCACTGGTGGAACAAAAACCTTAGTAGAATTCAATAACTCATGGCACAGCATGAAGAAATTACAACACCATGACCAAAACGGCATGTCGTTGAAGGAAGCTATAAGCGCAAGCATTTCAAGAGGGAAACTAGTTTCTGGGGCAACAAGCACTACTAAAACGAACCCATCATCTATGGTGCCATCTTTTGCGAACCCGTTTTGGATTGAAATTGTGACTCTTTCGAAACGTTCCTTCTTAAACTCGAAGAGGATGCCAGAGTTGTTTGGAATGAGAATGGGTACAGTGATGATAACAGGTTTCATTCTTGCAACCATGTTTTGGCAACTTGATAATTCACCAAAAGGGGTTCAAGAAAGGCTTGGCTTCTTTGCTTTTGCTATGTCCACCACTTACTACACCACCGCTGATGCACTCCCCGTGTTCCTTCAAGAACGTTACATTTTCATGAGAGAGACTGCTTACAATGCTTATCGAAGATCCTCGTACCTTGTCTCACATGCTCTTGTTTCTTTACCTGCTTTAGTGTTCCTCTCTTTGGCTTTTGCTTCAATCACTTTTTGGGCTGTGGGGCTTGATGGTGGATTTTCAGGGTTCTTGTTTTACTTTCTTATTATCCTTGCTTCATTCTGGGCTGGGAATTCCTTTGTCACATTCCTATCTGGTGTGGTTCCACATGTTATGATTGGTTACACAATCGTTGTTGCTATTCTTGCATATTTCTTGCTCTTCAGTGGTTTCTTCATCAATAGGGACAGGATCCCAAGTTATTGGATTTGGTTTCATTACTTATCTTTGGTGAAGTATCCTTATGAGGCTGTACTTCAGAACGAGTTTGATAATCATTATAAGTGTTTCGTGAAGGGGGTGCAGATATTTGATAATACACCACTTGGGTCGGTGCCTAATGCAATGAAGTTGAAGCTTTTGGAGAGCATGAGTAACACACTGGGAACTAGTATAACTAGCTCCACATGCTTGACAAAGGGTGCTGATATATTGCAGCAGAATGGGGTTACAGAATTCAACAAGTGGAACTGTTTGTTGCTCACAGTGGCTTGGGGTTTCTTCTTCAGGTTACTCTTCTATGTGTCATTGTTGGTGGGGAGCAAGAACAAGAGGAACTAA 2193 0.4669 MELHEVTRRPASNESLTLGQHLKHVGDVQKDASGDGSETPVHHALDISDCGVGNEPRAVPFVLSFGNLTYSVKIPWKLSFPALFPNRRSQLGAAAVAVEPIVGENMFTRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGKLKGTVALNGEALGSRLLKVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRSLSKSKKKARVQALIDQLGLRNAAKTIIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSVHQPSYRILSLLDRMIFLSRGQTVYSGSPSQLPSFFAEFGHPIPDTDNRTEFALDLIRDLEGSTGGTKTLVEFNNSWHSMKKLQHHDQNGMSLKEAISASISRGKLVSGATSTTKTNPSSMVPSFANPFWIEIVTLSKRSFLNSKRMPELFGMRMGTVMITGFILATMFWQLDNSPKGVQERLGFFAFAMSTTYYTTADALPVFLQERYIFMRETAYNAYRRSSYLVSHALVSLPALVFLSLAFASITFWAVGLDGGFSGFLFYFLIILASFWAGNSFVTFLSGVVPHVMIGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYLSLVKYPYEAVLQNEFDNHYKCFVKGVQIFDNTPLGSVPNAMKLKLLESMSNTLGTSITSSTCLTKGADILQQNGVTEFNKWNCLLLTVAWGFFFRLLFYVSLLVGSKNKRN 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0277 730 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 96 338 IPR003439 GO:0005524
Lal13g0277 730 ProSitePatterns ABC transporters family signature. 238 252 IPR017871 GO:0005524
Lal13g0277 730 Pfam ABC-2 type transporter 426 634 IPR013525 GO:0016020|GO:0140359
Lal13g0277 730 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 14 723 - -
Lal13g0277 730 SMART AAA_5 123 315 IPR003593 -
Lal13g0277 730 Gene3D - 105 329 IPR027417 -
Lal13g0277 730 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 329 IPR027417 -
Lal13g0277 730 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 14 723 - -
Lal13g0277 730 Pfam ABC transporter 114 266 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0277 Lal-Chr13 1732716 1734908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0277 113 325 Calmodulin-binding Proteins AT2G36910 28.636 1.36e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0277 K05681 - gmx:100803658 1194.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0277 13 1732716 1734908 Lal13g0277 13 1732716 1734908 ECH