Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0263 ATGCAGAAGAGTGGTGAAGATCAGAGTTGTCGTCGCAGGGTACGTCGTTCACGATGGAATAAAGCTGAAATGCATGTAATTCCTCCTATCACTGATTACGATAGGGAGTACTTTGAAGGCTACGCAGACCTTAGTGTCCATGAACACATGATCAAGGATACTGTCCGCACTAATACTTATAGGGATGCAATCATGTTTCATCGCCCTTCTATTCAAGGAAAAGTTGTAATTGATGTTGGCTGCGGCACCGGCATTCTTTCTATATTCTGTGCTCAAGCTGGTGCCAAGAGGTATATGTCTTGCAAGGTGTATGCTGTTGAGGCCAGTGACATTGCCATGCAGGCAGCACGTGTTGTTGAGGAAAATAATCTTTCAAATATCATCACCGTATTGCAAGGACGAGTTGAGGATGTTGAAATCAGAGAAAAGGCCGATGTTATAGTTTCAGAGTGGATGGGATATATGCTTCTATATGAGAGCATGCTTCAAAGTGTTATAATTGCCAGAGTTCGCTGGCTCAAACGTGGAGGTCTAATGCTTCCTTCAGATGCAACGCTGTACATGGCTCCTGTTACAAATATAGAAGTATACAGAGACACCACTGACTTCTGGGGCGACGTTTATGGAATTGATATGTCTCCCATTATACCATTATCAAAAAAGTGTGCATTTGAAGATCCTTCTGTGGAGATAATCACTAGTGAAAACGTTTTGACATGGCCAATAGAGGTAATACGTTTCGACTGTCATTTAGTTACCATTCCTAAGATAAAATCTATTACAACAAAGTTTCAGTTCGCGTCATTGTTTCAAGCTCCACTGCATGGTTTTGCATTTTGGTTTGATGTTGAATTTAATGGGCCTGTACTACAACCAATGCCAATCACATGGTTGCCATCAACTTCATCTATTGATGATCATCCAGAGAAGGAGGATGATAGCAGGAAGAGAAAAAGGGGGACAAAGCTTAGTGCAGCACCGATACTGTCCACTGCTCCTGAAGACCCTCAAACACATTGGGGACAGACCTTGATATACTTGAATAATCCAATAGAGCTGGAAAAATATCAGCTTATTGAAGGATCTTTAAACCTGTCACAAAATGAATATTGTGCCCGGTTTTTGAATATTCACTTGGAATATGCTTCAGGTGGTCACAGCTATGTGAAAGAGGCTATCTTTATGTAG 1188 0.4141 MQKSGEDQSCRRRVRRSRWNKAEMHVIPPITDYDREYFEGYADLSVHEHMIKDTVRTNTYRDAIMFHRPSIQGKVVIDVGCGTGILSIFCAQAGAKRYMSCKVYAVEASDIAMQAARVVEENNLSNIITVLQGRVEDVEIREKADVIVSEWMGYMLLYESMLQSVIIARVRWLKRGGLMLPSDATLYMAPVTNIEVYRDTTDFWGDVYGIDMSPIIPLSKKCAFEDPSVEIITSENVLTWPIEVIRFDCHLVTIPKIKSITTKFQFASLFQAPLHGFAFWFDVEFNGPVLQPMPITWLPSTSSIDDHPEKEDDSRKRKRGTKLSAAPILSTAPEDPQTHWGQTLIYLNNPIELEKYQLIEGSLNLSQNEYCARFLNIHLEYASGGHSYVKEAIFM 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0263 395 CDD AdoMet_MTases 76 180 - -
Lal13g0263 395 Gene3D - 183 393 - -
Lal13g0263 395 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 34 382 IPR025799 GO:0016274|GO:0018216
Lal13g0263 395 PANTHER BNAC03G41340D PROTEIN 27 392 - -
Lal13g0263 395 Gene3D Vaccinia Virus protein VP39 31 181 IPR029063 -
Lal13g0263 395 Pfam Ribosomal protein L11 methyltransferase (PrmA) 72 151 - -
Lal13g0263 395 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 41 385 IPR029063 -
Lal13g0263 395 MobiDBLite consensus disorder prediction 300 326 - -
Lal13g0263 395 MobiDBLite consensus disorder prediction 304 320 - -
Lal13g0263 395 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 27 392 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0263 Lal-Chr13 1649519 1652833 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0263 30 362 C2H2 Transcription Factor Family AT3G12270 33.333 1.59e-51 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0263 K11437 - gmx:100809174 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0263 13 1649519 1652833 Lal13g0263 13 1649519 1652833 ECH