Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0255 ATGTCTAACTCTGACGGCACCACTAACGGCGTCACCAACATTGACGCCCTCACCCACTCCGTCAAGAAACCTCCTTCCAAGGACCGCCACACCAAAGTCGACGGCCGTGGCCGACGCATACGCATGCCTATCATTTGCGCCGCACGTGTCTTCCAGCTCACACGTGAGTTAGGTCACAAGTCTGACGGCCAAACCATCGAGTGGCTCCTCCGCCAAGCTGAGCCTTCTATTATCGCCGCCACCGGCACCGGTACTACTCCGGCCACCTTCTCTTCCCTTTCTGTATCCCTTCGTTCCTCTGCCAACTCTCTCTCCTCTCCTTCCTCCACCTCTGATCATAAATCTCTCCTCACTAATACTCCCTTCATTCTCGGAAAGCGTATACGCACCGATGACGATGCTTCTGTAACTGCTAAAGATGACGTCGTTTCTAATGCCCCTTCTGGACTGTGGGCCCTACCTGCTAGGCCTGATTTTGGACAGATTTGGAGCTTCGCTGCTGCTGCTGCGGCCGCGGCTCCTCCGCCGGAGATGGTGTCAGTTTCTCAGCAGCAGCAAGCTTCTTTCTTCCTTCATCATCCGCAGCAGCAGCAGCAGCAGCAAGCAACAATGGGAGAAGCTTCGGCCGCAAGGCTGGGGAATTACCTTCCTGGTCATCTGAATTTGCTAGCTTCGTTGTCCGGAGGACATGGAAATAACGGTCGGAGAGACGATGAGCATCATTAA 726 0.5468 MSNSDGTTNGVTNIDALTHSVKKPPSKDRHTKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFSSLSVSLRSSANSLSSPSSTSDHKSLLTNTPFILGKRIRTDDDASVTAKDDVVSNAPSGLWALPARPDFGQIWSFAAAAAAAAPPPEMVSVSQQQQASFFLHHPQQQQQQQATMGEASAARLGNYLPGHLNLLASLSGGHGNNGRRDDEHH 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0255 241 ProSiteProfiles TCP domain profile. 26 80 IPR017887 -
Lal13g0255 241 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 238 - -
Lal13g0255 241 MobiDBLite consensus disorder prediction 1 37 - -
Lal13g0255 241 MobiDBLite consensus disorder prediction 1 16 - -
Lal13g0255 241 MobiDBLite consensus disorder prediction 21 37 - -
Lal13g0255 241 Pfam TCP family transcription factor 26 143 IPR017887 -
Lal13g0255 241 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 238 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0255 Lal-Chr13 1605582 1606307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0255 21 239 TCP Transcription Factor Family AT5G23280 66.376 1.10e-92 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal13g0255 TCP 3.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0255 K16221 - gmx:100799005 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0288 12 2056360 2057085 Lal13g0255 13 1605582 1606307 LSH