Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0252 ATGATGTTAATGCATTGTCATGAATTGTGCAAACCAGTTTCCATGATGATTGTAGTTAACTTAGCTCTAGCTTTTGTCAATATACTTCTGAAGAAGGTTCTTAATGAAGGAGTAAACTACATGTCTGTTGTAACATATAGACAAGTAATTTCATTTATCTTCATGGCACCTCTTGCATGCTTCTATGAAAGGAAACACAAACTAGAGGTTCCCATAATATGTCTCCTTTTCCTCAGTGCACTTATTGGAGTAACACTGAGCCAGTGCCTATTTCTTCTGGGACTTGGATATACATCTGCCACATTTGCATGTGCATTCCTCAACATGGTGCCTGTGTTTACGTTCATCATGGCACTGCCATTTGGGATAGAGAAGGTGAATATAAGAAGCAAGGGTGGTAAAGCCAAAGTTTTGGGAACTTGTTTAAGCATTGGTGGAGCTTTATTATTGGTCCTTTATAAAGGAATGCCCTTAACCAACCCACAATCACATCACTTAGCAAACAAAGTTACAAGTACAGCAGCAACAGCAACATTAGAGAAAAGGATCATAGGTTCAATACTTTTGATTGCAGGATGCATCTTATGGTCTTCATGGTTTATCATGCAAGCAAAGATTGGCAAAAAATATCCATGCAAGTACTCTAGCACAGCAATTTTATCACTTTTTGCTGCCATTCAATCAGCACTATTAAACTTGATCATGAAGAGAAATATTGCCTCTTGGATTATCAAGGGAAAGATAGAAATATTGACTGTTATATACTCTGGGTTGGTGGGTTCAGGCTTATGCTATGTGGCAATGTCATGGTGTGTCAAACAAAGAGGTCCAGTTTTCACAGCAGCATTTACCCCTCTTTTACAGATATATGTGGCTGTGCTTGATTTCTGTATATTGAAGGAAGAAATTTACATGGGAAGTATTGCAGGATCTGTGTTGGTTATTGGTGGCATGTATGTTCTTTTATGGGGGAAAAGTAAAGAGGGAGAGCAATATATCTTGAAGGATACTCAACCAAATGAACAAGATGTAGAATGTCAAGAGCAATGCCCAAAATCGTAA 1062 0.3804 MMLMHCHELCKPVSMMIVVNLALAFVNILLKKVLNEGVNYMSVVTYRQVISFIFMAPLACFYERKHKLEVPIICLLFLSALIGVTLSQCLFLLGLGYTSATFACAFLNMVPVFTFIMALPFGIEKVNIRSKGGKAKVLGTCLSIGGALLLVLYKGMPLTNPQSHHLANKVTSTAATATLEKRIIGSILLIAGCILWSSWFIMQAKIGKKYPCKYSSTAILSLFAAIQSALLNLIMKRNIASWIIKGKIEILTVIYSGLVGSGLCYVAMSWCVKQRGPVFTAAFTPLLQIYVAVLDFCILKEEIYMGSIAGSVLVIGGMYVLLWGKSKEGEQYILKDTQPNEQDVECQEQCPKS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0252 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 327 - -
Lal13g0252 353 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Lal13g0252 353 Pfam EamA-like transporter family 13 151 IPR000620 GO:0016020|GO:0016021
Lal13g0252 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Lal13g0252 353 PANTHER WAT1-RELATED PROTEIN 10 349 IPR030184 GO:0016021|GO:0022857
Lal13g0252 353 PANTHER WAT1-RELATED PROTEIN 10 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0252 Lal-Chr13 1597384 1603796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0252 8 256 Nodulin-like Gene Family AT3G30340 47.809 7.22e-78 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0252 - - gmx:100802053 563.918