Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0231 ATGGGTAGTTGTGGAAGGGAAGGTGCAGTGAGACAGTATATAAGGTCAAAGGTCCCTCGTTTAAGGTGGACTCATGACCTTCATCGTTGCTTTGTTCATGCCATTAACAGCCTTGGTGGTCATCACAAAGCTACTCCTAAGCTTGTTCTTCAGTTAATGGATGTCAAAGGCCTCACCATTTCACACGTCAAGAGCCATCTTCAGATGTATAGAAGCATGAGAGGTGACTTGGGAAGAAAAGGTAGGACATTGACCCAACATAGAAACCAATCTTTTGAGCACTATGATGGCTGTGTTAATGAAGTGAATGGTGTTGGGGTTCACTACCCTGCTTGCTCAAAAGCCATTGCAAAAGAATCTGATTCCCTCTTCAGCTACAGTAATCACTCCCCAAAAAGAGCTAGAATCGATACAAGGAGTTGTTGCATCTCAAAGAGCCAAAGAATATGTGATGCAGTGCCAAATACGTACCAATGCTTTTATGATATGGGAGAGAAGAAAACTGAGCAGAAGGTAATAAAGGAGAGTGGTTACTGTATTGTTGGTGGTTCAAGATGGCTGACACAACAACAGCAACCACATTCACACACTCTGCTACCAGATTTTGATAACCTCACTTCATTCCAAGAATCTGATTTCCTTCAGGTTACTAGATTAAATGAAAGCAAGACCACTTCACAGCCAATGAAAGTAGTTGTGAACACTAAGAGGAAGGCACATGGAGAAGATGAAAATGTGGGAAAATGTGAGTTGCCATTATCACTCCTATTGCTAAATCCTTCCCCTCAAGGGAGTAATGCTTCTTCAGCAAGTAAGATCAGTGAGACAATTTCATCATGGCATGGGTTCACCAACTACAAGGACTGCTCTAATATTTCCAGTGTCAAAGATAGGATTAATTTGGACTTGTCTTTAGCCCTATGTGGAAATTGA 933 0.4169 MGSCGREGAVRQYIRSKVPRLRWTHDLHRCFVHAINSLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRKGRTLTQHRNQSFEHYDGCVNEVNGVGVHYPACSKAIAKESDSLFSYSNHSPKRARIDTRSCCISKSQRICDAVPNTYQCFYDMGEKKTEQKVIKESGYCIVGGSRWLTQQQQPHSHTLLPDFDNLTSFQESDFLQVTRLNESKTTSQPMKVVVNTKRKAHGEDENVGKCELPLSLLLLNPSPQGSNASSASKISETISSWHGFTNYKDCSNISSVKDRINLDLSLALCGN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0231 310 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Lal13g0231 310 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 310 - -
Lal13g0231 310 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 310 IPR044848 GO:0003700
Lal13g0231 310 SUPERFAMILY Homeodomain-like 17 73 IPR009057 -
Lal13g0231 310 Gene3D - 18 74 - -
Lal13g0231 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0231 Lal-Chr13 1472897 1476604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0231 1 74 G2-like Transcription Factor Family AT1G14600 70.886 3.46e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal13g0231 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0231 - - gmx:100787188 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0261 12 1872836 1876852 Lal13g0231 13 1472897 1476604 LSH