Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal13g0218 | ATGGTTGAAACCCGTCGAAGCTCCTCATCTTCAAAGCGTACTTTCTCTTCTCCTTCTTCTTCCACCGCCAAAAGATCCAAGGTTTCCGAAGATGCCTCACCATCAACTCTTCACGCTCCGGGAACTATTTCTCGCGCCAAAGATTCTGAAACCCGAATTGATTCCCGACAATCGGAGCTCCGGTCCGCTGATCTGCCTGATACGGCGTCGTTAAAGCCGGTGGATGATTGCGTTGAAGATAAGCCTCCTTTTAAGCCCGTTCAAGTCGAGGATTTGGTGTCCCCTCAGTATCCAGGTGAATCTGCGCCGGATGCGGATAAATCAAAGGCAGCTCGTACAGCGGCAGGTAGGTCCAAGAAACGGGTGACTAAATCCACAAAACCGGTCCCCAAGGCTGTGTGGGGAAATCTCCTTTCTCAGTGTTCTCAGAATCCTCACTTGTCCATGTTTGATCCTATCTTCACTGTTGGTCAAGGTCGTCAATGTAATTTATGGCTTAAAGATCCCTCTGTTGGTAATGTTTTGTGCAAGTTGAGCCACATAGAGCGTGGAGGTTCGTCTGTTGCATTACTGGAAATAACAGGGGGTAAAGGTGCTGTTCAAGTCAATGGTAAGACCCACCGGAAGAATGTCCGTCAAATTTTGAGTGGAGGTGATGAGGTGGTCTTCGGTTCTTCCGGCAAGCATGCTTATCCACTCATGAATAATATTACTACTACTGGCATACCTTCATCCATGAGTAACTTTGAAGCCAAGGGAGCTCCAGTAGATGGAATAAAATTTGTGGCTAGATCTGGGGACTCTTCAGCTGTTGCTGGCGCATCAATATTGGCCACATTATCTGATCTACATAATGATTTATCTCTCCTTTCACCAGCTGCTACAACTGGCAAGAATGTCCAGCAGAATACTGGCAGTTCATCACCTTCTGGCCACGGGGATGATATCCCGGACAATGAAATGAAGGCTACCACCAGCAGTGATGAACCACCTAGAGGTGTTTCTGCTGAGAAAACTGTTCTTGCATCCTCTAATTCTGTTAATGAAAATCCCAGACTAGACACCATGGAAGTCGATGCCAATGTGGATGCAGATGCTGGGAAGATCACTGCTTCTTCCGAGTTGAGGTCATTATTGCGGATGCTTTCTGGTTCCTGTCCTGAACTTGATTTAAGCAGTAGCGTTTCCAAGATATTAAAAGAACGGTGGGAATTAAGAAAATTCCTTAAAGATGTTGATACTCCAACAATATTAGCATCAACCAAGCACCAAGCATTCAACGACAGTTTACAACAAAGAATTCTCACTGCTGACAATATTGATGTTTCATTTGAAAATTTTCCTTATTATCTAAGTGATACAACAAAGAATGTTTTGACCGCCTCTACATATATTCATTTGAAGTGCGATGGCTTTGGAAAATATGCTTCAGACCTCCCATCGGTGTCCCCACAGATATTGTTATCCGGTCCTGCAGGTACGGAAATATATCAAGAGACTTTGTGCAAGGCACTTGCTAAGCATTTTGGCGCCAAAATATTAATTGTGGATGCTCTTTCCATACCCGATGCAGCACCATCAAAGGAAGTTGATTCTGCCAAAGAAAGTTCAAGGCCTCAAAGACCATCTGTGTTTGCTAAGAGAAGTATCCAGGTCGCCAAGTTACTGCAGAAGAAACCAGCTTCTAGTGTTGATGCTGAAATTATTGGTGGATCTACATTAAGTTCTCAGGCTACTCTTAAGCAAGAGGTTTCTACTGCATCATCAAAAGGCAGTACTCTTAAGACAGGTGATCGAGTAAAATTTGTTGGTAACTTCCCTTCTGATGTCTCATCGCTACAGAGTAATCCTTCAAGGGGACCAAGCTATGGTTCCCGGGGTAAAGTTCTCCTTGCTTTTGAAGATAACGAGTCTTCAAAAATTGGAGTTAGGTTTGACAAAACAATTCAACATGGTAATGATCTTGGAGGCCTTTGCGAAGATGATCGTGGATTCTTTTGTTCTGCAAATCATTTACTACAAGTAGATGGTACCACAGGGGATGACATTGACAAGCTTGCAATTAATGACCTTTTTGAGAGTAAAAGTGGTGCTCTAGTGTTTTTCATTAAGGATATAGAGAAGTCAATGGTTGGTAACTCTGAAATTTTGAAAAGTAAATTTGAAAACTTGCCACAGAATGTTGTTGTAATTGGCTCACATACCCAGCTGGACAACCGTAAGGAAAAGACTCAACCGGGTGGCCTTCTATTTACAAAGTTTGGGAGCAATCAGACCGCACTACTCGATCTTGCTTTTCCGGATAACTTTAGTAGACTGCATGATAGGAGCAAAGAAACCCCCAAAGTAATGAAACAACTTAATCGCCTTTTCCCAAACAGGGTGACAATACAACTGCCTCAGGATGAGGCTCTACTTTCTGATTGGAAGCAGCAACTAGAACGCGACATTGAGACTATGAAAGCCCAGTCCAATGTTATCAGCATACGCTCAGTTCTCAACAAGATTGGATTGAATTGCTCTGACATCGAGTCACTTTGCATCAAGGATCAAACCCTAACATTCGAAAGTGTGGAGAAGATAATTGGCTGGGCTATAAGTTACCATTTTATGCAGTCATCTGAGTCTTCTAACAAAGACTCCAAGCTTGTGATATCTGCAGAAGGCATTAAGTATGGGCTAAATATTCTACAAGGCATTCAAAATGAAAACAAGAGCTCAAAAAAATCACTGAAGGATGTGGTAACTGAGAATGAATTTGAGAAAAAACTGCTCGGTGATGTTATTCCACCAAGTGATATTGGGGTCACATTTGATGATATTGGAGCTTTAGAGAATGTGAAAGATACCTTGAAGGAATTGGTTATGCTTCCTCTTCAAAGACCTGAATTGTTTTTCAAAGGACAATTGACAAAGCCTTGCAAGGGAATATTGCTTTTTGGCCCACCTGGCACTGGAAAAACAATGCTTGCGAAGGCTGTAGCAACTGAGGCTGGAGCAAATTTTATAAATATTTCGATGTCCAGCATTACTTCTAAGTGGTTTGGTGAAGGGGAAAAATATGTTAAAGCAGTCTTTTCTCTGGCCAGCAAAATTGCTCCAAGTGTTATTTTTGTTGATGAGGTTGACAGTATGCTAGGGAGACGTGAAAATCCTGGTGAGCACGAGGCTATGCGTAAAATGAAGAATGAGTTTATGGTTAATTGGGATGGTCTGCGTACCAAAGATAAAGAGCGTGTACTTGTTCTTGCTGCTACAAACCGACCTTTTGATCTTGATGAGGCTGTTATTAGGAGGCTTCCGCGCAGATTGATGGTTAATTTGCCAGATGCTCCTAATAGAGAAAAAATTATGAGAGTCATTTTAGCTAAAGAAGATTTGGCACTAGATGTTGATTTGGAAGCAATAGCAAATATGACTGATGGATATTCGGGTAGTGACTTAAAGAATCTGTGTGTTACAGCAGCACACTGCCCAATAAGAGAGATTTTAGAGAAGGAAAAGAAGGAGAGAAATTCAGCATTGGCTGAGAACAAACCTTTACCTGTATTGTGTAGCAGTGCTGACATTCGTCCCTTGAAGATGGAAGATTTTAGATATGCACATGAGCAGGTTTGTGCCAGCGTGTCAACCGAATCATCAAATATGAATGAGCTACTCCAATGGAATGACCTTTACGGAGAAGGTGGATCAAGAAAAATGAGATCTTTGAGCTATTTCATGTAA | 3726 | 0.4216 | MVETRRSSSSSKRTFSSPSSSTAKRSKVSEDASPSTLHAPGTISRAKDSETRIDSRQSELRSADLPDTASLKPVDDCVEDKPPFKPVQVEDLVSPQYPGESAPDADKSKAARTAAGRSKKRVTKSTKPVPKAVWGNLLSQCSQNPHLSMFDPIFTVGQGRQCNLWLKDPSVGNVLCKLSHIERGGSSVALLEITGGKGAVQVNGKTHRKNVRQILSGGDEVVFGSSGKHAYPLMNNITTTGIPSSMSNFEAKGAPVDGIKFVARSGDSSAVAGASILATLSDLHNDLSLLSPAATTGKNVQQNTGSSSPSGHGDDIPDNEMKATTSSDEPPRGVSAEKTVLASSNSVNENPRLDTMEVDANVDADAGKITASSELRSLLRMLSGSCPELDLSSSVSKILKERWELRKFLKDVDTPTILASTKHQAFNDSLQQRILTADNIDVSFENFPYYLSDTTKNVLTASTYIHLKCDGFGKYASDLPSVSPQILLSGPAGTEIYQETLCKALAKHFGAKILIVDALSIPDAAPSKEVDSAKESSRPQRPSVFAKRSIQVAKLLQKKPASSVDAEIIGGSTLSSQATLKQEVSTASSKGSTLKTGDRVKFVGNFPSDVSSLQSNPSRGPSYGSRGKVLLAFEDNESSKIGVRFDKTIQHGNDLGGLCEDDRGFFCSANHLLQVDGTTGDDIDKLAINDLFESKSGALVFFIKDIEKSMVGNSEILKSKFENLPQNVVVIGSHTQLDNRKEKTQPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKVMKQLNRLFPNRVTIQLPQDEALLSDWKQQLERDIETMKAQSNVISIRSVLNKIGLNCSDIESLCIKDQTLTFESVEKIIGWAISYHFMQSSESSNKDSKLVISAEGIKYGLNILQGIQNENKSSKKSLKDVVTENEFEKKLLGDVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFFKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKIMRVILAKEDLALDVDLEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERNSALAENKPLPVLCSSADIRPLKMEDFRYAHEQVCASVSTESSNMNELLQWNDLYGEGGSRKMRSLSYFM | 1241 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal13g0218 | 1241 | MobiDBLite | consensus disorder prediction | 294 | 313 | - | - | |
Lal13g0218 | 1241 | SUPERFAMILY | SMAD/FHA domain | 142 | 226 | IPR008984 | GO:0005515 | |
Lal13g0218 | 1241 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Lal13g0218 | 1241 | SMART | AAA_5 | 973 | 1110 | IPR003593 | - | |
Lal13g0218 | 1241 | Gene3D | - | 935 | 1214 | IPR027417 | - | |
Lal13g0218 | 1241 | CDD | AAA | 975 | 1108 | - | - | |
Lal13g0218 | 1241 | ProSitePatterns | AAA-protein family signature. | 1080 | 1099 | IPR003960 | GO:0005524|GO:0016887 | |
Lal13g0218 | 1241 | Gene3D | - | 119 | 232 | - | - | |
Lal13g0218 | 1241 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 1 | 1241 | - | - | |
Lal13g0218 | 1241 | MobiDBLite | consensus disorder prediction | 1 | 128 | - | - | |
Lal13g0218 | 1241 | MobiDBLite | consensus disorder prediction | 45 | 61 | - | - | |
Lal13g0218 | 1241 | CDD | FHA | 159 | 225 | IPR000253 | GO:0005515 | |
Lal13g0218 | 1241 | Gene3D | - | 1109 | 1203 | - | - | |
Lal13g0218 | 1241 | PANTHER | P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN | 1 | 1241 | - | - | |
Lal13g0218 | 1241 | MobiDBLite | consensus disorder prediction | 294 | 336 | - | - | |
Lal13g0218 | 1241 | Pfam | AAA+ lid domain | 1130 | 1166 | IPR041569 | - | |
Lal13g0218 | 1241 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 936 | 1215 | IPR027417 | - | |
Lal13g0218 | 1241 | Pfam | ATPase family associated with various cellular activities (AAA) | 977 | 1106 | IPR003959 | GO:0005524|GO:0016887 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal13g0218 | Lal-Chr13 | 1385046 | 1397047 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal13g0218 | 936 | 1188 | Calmodulin-binding Proteins | AT3G56690 | 38.846 | 5.39e-42 | 166 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal13g0218 | - | - | gmx:100801477 | 1865.89 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal13g0218 | 13 | 1385046 | 1397047 | Lal13g0218 | 13 | 1385046 | 1397047 | ECH |