Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0211 ATGGCTTTCAATTCCAGCTCTGTAGTTGTGAGGATGGGGTTATCTTCATCCCAAGATGCTGCTTCTGTGGATTCTGTGACTCTCTTTGTGCTTCTCCTTTGTTCTTGTATTCTCTTTGGCCATCTTCTGCAAAAGAGTAAATGGATGACTGAGTCAGTTGTTGCCTTAATCATTGGCCTTATTACTGGAATTATAATTCTACTGACAACTGGGGGCAAAAGTTCACGCATCTTAGTATTTGATGAAGATCTTTTCTTTATATATCTTCTTCCACCCATCATATTTAATGCAGGGTTCCAGGTGAAAAAGAAGCAATTCTTTCGGAACTTTTTGGCAATTATGTTGTATGGTGTTATTGGCAGTCTAATATCTTTTCTCATTGTGTCACTGGGTTCAATACAGTTGTTCAAAAAGTTGGACATCGATTTAGTGACTGTGGGAGACTATTTTGCACTTGGAGCAGTATTTTCAGCTACAGATTCTGTGTGCACATTACAGGTACTTGATCAGGACGAAACGCCTCACTTATACAGTTTAGTCTTCGGTGAAGGTGTTGTGAATGATGCCACATCTGTGGTTCTTTTTAACGCAATCCAAAAACTTGATCTCTCACACATCACTCCAGCCAACATTATGCAATTCATTGGCAACTTTTTATACTTATTCTTGACAAGCACTTTGCTGGGAATAGTGGTTGGCTTGTTTAGTGCTTACTTGATAAAGAAGTTGTATTTTGGCAGACATTCCACTGACAGAGAAATTGCTCTTATGATCCTGATGGCTTACTTTTCTTATATGTTGGCTGAACTTCTTGATTTAAGTGGGATCCTTACTGTCTTCTTTTGTGGAATTGTCATGTCTCACTACACTTGGCATAATGTCACTGAGAATTCTAGAATCACAAGCAGGCATGCTTTTGCAACTTTCTCTTTAATCTCGGAGATTTTCATCTTCTTGTATGTTGGTATGGATGCCTTGGATATAGAGAAGTGGAGATTTGCCAGCAACAGTCCATGGACATTATTTGGAACAAGTGCAATACTGCTTAGCTTGGTTTTAATAGGAAGGGCAGCTTTTGTGTTCCCACTATCATTTATAGCTAATTTATTCAGAAAGTCTAGGAATGACAAGATTGCATTTAAGCAGCAGGTTGTTATATGGTGGTCTGGGCTAATGAGAGGTGCTGTATCCATTGCACTTGCATATAATAAGTTCACTACATCAGGGCATACACAAGTTCAAGGGAATGCTATCATGATCACTAGCACCATAACAGTTGTTCTGTTAACTAATGTGGTGGGTGGGTTACTAACCAAGCCTCTAGTAAGGTTCTTGTTGGATCCACATATGCATGTAGGAGAGAGTTCAATTTCATCTGGTTTATTTTCTGCTAAAAATCTACCTCTTCTAACAAATGGGCAAGATATAGAATCTAGCATAGACGCTGGAAACCCACTAGACTCGAGTAAACTTGTCCATCAATATTGGAGAACATTTGATGATACTTTCATGCGCCCTGTATTTGGAGGTAGAGGATTTGTACCTATTATTCCTGCTTCAACAACAGAGGACAATATACATTAG 1584 0.3889 MAFNSSSVVVRMGLSSSQDAASVDSVTLFVLLLCSCILFGHLLQKSKWMTESVVALIIGLITGIIILLTTGGKSSRILVFDEDLFFIYLLPPIIFNAGFQVKKKQFFRNFLAIMLYGVIGSLISFLIVSLGSIQLFKKLDIDLVTVGDYFALGAVFSATDSVCTLQVLDQDETPHLYSLVFGEGVVNDATSVVLFNAIQKLDLSHITPANIMQFIGNFLYLFLTSTLLGIVVGLFSAYLIKKLYFGRHSTDREIALMILMAYFSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTENSRITSRHAFATFSLISEIFIFLYVGMDALDIEKWRFASNSPWTLFGTSAILLSLVLIGRAAFVFPLSFIANLFRKSRNDKIAFKQQVVIWWSGLMRGAVSIALAYNKFTTSGHTQVQGNAIMITSTITVVLLTNVVGGLLTKPLVRFLLDPHMHVGESSISSGLFSAKNLPLLTNGQDIESSIDAGNPLDSSKLVHQYWRTFDDTFMRPVFGGRGFVPIIPASTTEDNIH 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0211 527 PANTHER SODIUM/HYDROGEN EXCHANGER 9 526 - -
Lal13g0211 527 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal13g0211 527 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal13g0211 527 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal13g0211 527 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal13g0211 527 PANTHER SODIUM/HYDROGEN EXCHANGER 9 526 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lal13g0211 527 Pfam Sodium/hydrogen exchanger family 30 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal13g0211 527 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 26 445 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal13g0211 527 Gene3D - 146 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0211 Lal-Chr13 1331076 1336094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0211 6 527 Antiporters AT3G05030 64.378 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0211 - K14724 qsu:112020558 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0211 13 1331076 1336094 Lal13g0211 13 1331076 1336094 ECH
Lal12g0241 12 1688618 1693598 Lal13g0211 13 1331076 1336094 ECH