Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0204 ATGAAGAGCACATTTTGTGTAGTAGTTTGTGTGGTACTTGTGGGTTTCCATGGGGTTTGTGAAGGAGGAAGTCTGAGGAAGAATTTCTACAAGAATTCCTGCCCTGAAGCTGAGAGGATCATTAACACCAAAATCCAACAACATGTCTCTGCTAATCCCAATTTGCCTGCCAAGTTGCTTAGACTGCATTTTCATGACTGTTTTGTCAGGGGTTGTGATGGCTCAATTTTGTTGGTCTCAACTGCCAATAATAGTGCAGAGAAGGATTCAATTCCAAATTTAACATTGTCTGGCTTTGAAGTCATAAATAATATTAAAGATGCAGTTGAAGCAATATGTCCCAAAACTGTATCTTGCGCAGACATTCTAACATTGGCAACTAGGGATGCTGTTTCTGTTCAATTTAAGAAACCTCTGTGGGAGGTGCTAACAGGAAGGAGAGACGGCAATGTATCGAACAGAAACGAAGTATTCGCGAATATCCCATCACCTTTCTTCAACTTCACTCAACTCAAACAAAACTTTGCAAGTAAAGGTCTCACTTTGCATGACCTGGTTGTATTGTCAGGAGCACACACAATTGGAGTAGGGCATTGCAGCTTGCTTAGGAACAGGCTTTATAATTTCACCGGAAAAGGTGATCAAGACCCTTCTTTGGATACTAGATATGCTACATTCTTGAAGACTAAATGCCAGAGTTTGAGTGATATAACCACAACCGTGGACATGAATCCTGGCAGCTCTACCAATTTCAATACAAACTATTATCCGAATCTTCTTCAGAAAAAAGGTTTGTTCTCATCAGATGCTGCCCTTCTCACACACAAACAATCTGCAGATATTGCTAAGGAATTGGTTGATGAAGCCAAATTCTTGGTCGAGTTCGCGCAGTCTATGAAGAGGTTGGGAGCCATTGGGGTCCTCACAGGCTCAGCTGGGGAAATTAGGAACAATTGTTCCCTTGTCAACTCTTAA 975 0.4144 MKSTFCVVVCVVLVGFHGVCEGGSLRKNFYKNSCPEAERIINTKIQQHVSANPNLPAKLLRLHFHDCFVRGCDGSILLVSTANNSAEKDSIPNLTLSGFEVINNIKDAVEAICPKTVSCADILTLATRDAVSVQFKKPLWEVLTGRRDGNVSNRNEVFANIPSPFFNFTQLKQNFASKGLTLHDLVVLSGAHTIGVGHCSLLRNRLYNFTGKGDQDPSLDTRYATFLKTKCQSLSDITTTVDMNPGSSTNFNTNYYPNLLQKKGLFSSDAALLTHKQSADIAKELVDEAKFLVEFAQSMKRLGAIGVLTGSAGEIRNNCSLVNS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0204 324 SUPERFAMILY Heme-dependent peroxidases 25 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 PANTHER PEROXIDASE 25-RELATED 4 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 Pfam Peroxidase 43 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 PANTHER PEROXIDASE 4 322 - -
Lal13g0204 324 CDD secretory_peroxidase 25 322 IPR033905 GO:0004601|GO:0042744
Lal13g0204 324 ProSiteProfiles Plant heme peroxidase family profile. 24 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Lal13g0204 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0204 324 Gene3D - 28 323 - -
Lal13g0204 324 Gene3D Peroxidase, domain 2 162 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0204 Lal-Chr13 1290922 1292941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0204 9 324 Peroxidase AT1G05260 53.918 6.57e-113 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0204 K00430 - gmx:100799691 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0204 13 1290922 1292941 Lal13g0204 13 1290922 1292941 ECH