Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0202 ATGGGGTCGTCGAAGCCATGGCTGTACCCTGCTCCAACTTATCGCAAATTAGATAGTTATTGGGATACGGATCAAGATTCTCCTGGTCCTCGATGTGGTCACACTCTCACCGCCGTCGCTGCCACCAAGTTACATGGCCCTCGCTTAATTCTATTTGGTGGCGCCACCGCTATCGAAGGAGGATCTTCCTCCGCTCCTGGCATTCGATTAGCTGGAGTCACTAATTCTGTTCATTCCTATGATGTTTTAACAAGGAAATGGACTAGTATTAAACCCTCTGGAGATCCACCCTCCCCTCGGGCTGCTCATGCTGCGGCTGTCGTTGGCACCATGGTTGTTTTTCAGGGTGGGATAGGTCCTGCTGGACATTCTACGGATGATCTCTATGTGCTTGACTTGACCAATGATAAGTACAAATGGCATAGAGTCGTTGTACAAGGACAAGGACCTGGTCCTCGCTACGGCCATGCAATGGACTTGGTTGCTCAGAGATATCTTGTTACTGTCAGTGGAAATGATGGTAAAAGAGTTGTGTCTGATGCCTGGGCTTTGGATACGGCTCAAAAACCTTACATGTGGCAGAGGCTGAACCCAGAAGGTGATAAACCTTCTGCTAGAATGTATGCAACGGCTAGTGCCCGCTCCGATGGAATGTTTTTGCTGTGTGGTGGAAGAGACTCTTCTGGAGCGCCACTATCAGATGCCTATGGACTGCTCATGCATAGGAATGGCCAGTGGGAGTGGACTCTTGCTCCCGGTGTTTCCCCTTCACCAAGGTATCAACATGCTGCGGTTTTTGTTGGTGCTAGATTGCATGTCACGGGAGGTGTTCTCAAGGGTGGACGAGCTGTAGAAGGTGAAGCATCAATTGCAGTATTGGACACTGCTGCTGGGGTTTGGTTGGACAGAAATGGCATCGTTTCTTCCTCACGCACAAACAAAGGTCATGATTATGACCCTTCTTTGGAGCTTATGCGTCGTTGTCGCCATGCAGCAGCGGCTGTTGGTGCTCGTGTATATATCTATGGTGGTCTAAGAGGAGACACACTATTGGATGATTTCGCAGTGGCTGAAAATTCTCCACCGCCTCAAACTGATGTCAATTCTCCCACGTTAACATCTGAGAGGACTTCACCAATAACAAGCCCGAAACAGAATCAGTCTAACATGAATCATGACATAACACCAAGTTCAGAGGGTGGACCAGAAATTTCTTTATCTGGTGGCATGGGAATGGACCAAAACTCCTTGGAAAAACTGAGGGTGGCATCAGCTGAAGAAGCTAAAGCAGCGAGTGCTGTCTGGCAAAATTTGCAGGGTTTACCAGATAGCCATGCTGAAGAAACATCAGTATCAGATGAGAACTCGCAAGCTGCAGAAACAGTTTCAGATGGAAGTGATACAGAGGGGGATGTTCGCCTTCATCCCAGAGCTGTTGTAGTTGCTAAAGAGACTATAGGTAACTTAGGTGGATTGGTGCGACAGTTATCGCTTGACCAATTTGAAAATGAAAGCAGACGTATGGTTCCCATAAATAATGATTCGCCATATCCTACAAAAAAGTTCACAAGGCAAAAATCCCCTCAGGGTTTGCACAAAAAGATAATTTCAAATTTGCTTAAGCCTCGCAACTGGAAAGCTCCTGCTAACAGGCGGTTCTTCTTGGATCCTTATGAAGTGGGTGAGCTTTGCTATGCGGCTGAGCAAATATTTATGCACGAACCTACTGTTCTTCAGCTGAAAGCTCCGGTCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATATGATGCGTCTTTTTGATGAATATGGATTTCCTTCAACTGCAGGGGACATCACGTATATAGATTACCTTTTTTTGGGAGATTATGTTGATCGAGGACAACATAGCTTGGAAACTATCACCTTGCTACTTGCACTTAAGATCGAGTATCCCGATAATCTTCACTTGATACGTGGAAACCATGAAGCTGCCGACATAAATGCACTATTTGGTTTTCGTATAGAGTGCATTGAAAGAATGGGAGAAAATGATGGAATATGGGCATGGACACGATTCAATCAACTTTTTAACTATCTCCCACTTGCTGCTCTCATTGAAAAGAAAATTATTTGTATGCATGGTGGCATTGGAAGGTCTATCCATTCAGTAGAACAGATAGAAAAGCTTGAAAGGCCCATAACAATGGATGCAGGATCTATTATTTTAATGGACCTTCTGTGGTCTGACCCCACAGAAAATGACAGTGTAGAGGGTTTGAGACCAAATGCTAGAGGGCCTGGGCTTGTCACTTTTGGGCCTGATCGTGTCACAGAATTCTGCAAGAAAAATAAATTACAACTCATTATAAGAGCCCATGAATGTGTCATGGATGGTTTTGAGCGATTTGCGCAGGGACAATTAATCACACTTTTTTCTGCTACTAACTATTGTGGAACGGCAAACAATGCTGGAGCTATACTTGTAGTTGGTAGAGGCTTAGTTGTGGTTCCAAAATTAATTCATCCCATACCACCTCCTATTCAGTCTCCAGAGACTTCTCCTGAACGTGTCATGGATGAAACATGGATGCAGGAGCTTAATATTCAGAGGCCACCAACTCCTACTAGGGGTAGACCACAGCCTGATCTTGACCGTGGCTCACTAGCATATATATGA 2661 0.4521 MGSSKPWLYPAPTYRKLDSYWDTDQDSPGPRCGHTLTAVAATKLHGPRLILFGGATAIEGGSSSAPGIRLAGVTNSVHSYDVLTRKWTSIKPSGDPPSPRAAHAAAVVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHAMDLVAQRYLVTVSGNDGKRVVSDAWALDTAQKPYMWQRLNPEGDKPSARMYATASARSDGMFLLCGGRDSSGAPLSDAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLKGGRAVEGEASIAVLDTAAGVWLDRNGIVSSSRTNKGHDYDPSLELMRRCRHAAAAVGARVYIYGGLRGDTLLDDFAVAENSPPPQTDVNSPTLTSERTSPITSPKQNQSNMNHDITPSSEGGPEISLSGGMGMDQNSLEKLRVASAEEAKAASAVWQNLQGLPDSHAEETSVSDENSQAAETVSDGSDTEGDVRLHPRAVVVAKETIGNLGGLVRQLSLDQFENESRRMVPINNDSPYPTKKFTRQKSPQGLHKKIISNLLKPRNWKAPANRRFFLDPYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDMMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPDNLHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPIPPPIQSPETSPERVMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0202 886 Pfam Serine-threonine protein phosphatase N-terminal domain 534 581 IPR031675 -
Lal13g0202 886 Gene3D - 10 195 IPR015915 GO:0005515
Lal13g0202 886 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 4 886 - -
Lal13g0202 886 Pfam Calcineurin-like phosphoesterase 583 790 IPR004843 GO:0016787
Lal13g0202 886 MobiDBLite consensus disorder prediction 444 464 - -
Lal13g0202 886 PRINTS Serine/threonine phosphatase family signature 583 610 IPR006186 GO:0016787
Lal13g0202 886 PRINTS Serine/threonine phosphatase family signature 618 645 IPR006186 GO:0016787
Lal13g0202 886 PRINTS Serine/threonine phosphatase family signature 651 675 IPR006186 GO:0016787
Lal13g0202 886 PRINTS Serine/threonine phosphatase family signature 689 715 IPR006186 GO:0016787
Lal13g0202 886 PRINTS Serine/threonine phosphatase family signature 719 746 IPR006186 GO:0016787
Lal13g0202 886 PRINTS Serine/threonine phosphatase family signature 779 799 IPR006186 GO:0016787
Lal13g0202 886 PRINTS Serine/threonine phosphatase family signature 801 817 IPR006186 GO:0016787
Lal13g0202 886 Gene3D - 513 861 IPR029052 -
Lal13g0202 886 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 4 886 - -
Lal13g0202 886 MobiDBLite consensus disorder prediction 356 412 - -
Lal13g0202 886 SMART pp2a_7 555 839 IPR006186 GO:0016787
Lal13g0202 886 ProSitePatterns Serine/threonine specific protein phosphatases signature. 652 657 IPR006186 GO:0016787
Lal13g0202 886 SUPERFAMILY Metallo-dependent phosphatases 537 847 IPR029052 -
Lal13g0202 886 PIRSF STPPP_BSU1 1 886 IPR012391 GO:0004721|GO:0009742
Lal13g0202 886 MobiDBLite consensus disorder prediction 361 402 - -
Lal13g0202 886 MobiDBLite consensus disorder prediction 444 473 - -
Lal13g0202 886 SUPERFAMILY Kelch motif 74 357 IPR015915 GO:0005515
Lal13g0202 886 MobiDBLite consensus disorder prediction 862 886 - -
Lal13g0202 886 Pfam Kelch motif 97 134 - -
Lal13g0202 886 Gene3D - 196 391 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0202 Lal-Chr13 1275546 1287268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0202 544 782 Calmodulin-binding Proteins AT5G63870 30.072 5.04e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0202 K01090 - gmx:100805538 1633.62