Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0174 ATGGGAAGCACAATAAATCTGAGGAACTTGAAACTATGTTTCTCAAAATCAACAACAAACCACAGTGTCACTGTTGCATCTTCATCACATGATGATTATAATAATAATAATAACCTGCTTCCATGTCCAACTTCACCACCCTTCATGAAGAACTTCAACTCTCTCTATGAACCAGAACCTGAAGTAGCTGCTGATTTAGCAACTGCCTTGGCTTCTCAACGCTTCTTTTTCTCTTCACCTGGCAAATCAAATTCACTCATTGAATACACACGACAAAAGCATTCATCTTTGGTGGAGGGTAATGGTGAGAATAAGAATAAGAAGAAGAAGAAGAATAAGGTGTTGTTATTCAAGGGAAGTGTGGCGGTGCCAACTTACTCGCCGGATCCTTACTCAGATTTCCGGCGATCCATGCAGGAGATGGTGGAGGCGCGTCCTGAGCTTATGGATGTTAACTCCAATTGGAATGTTCTACACCAACTTCTGCTTTCTTATCTTGCTCTCAATCCAAAACCCACTCACAATTTCATTCTAAGTGCTTTTTCTGATCTTCTCATTTCATTGATGGAAGTTACAGTTTCATAA 585 0.4017 MGSTINLRNLKLCFSKSTTNHSVTVASSSHDDYNNNNNLLPCPTSPPFMKNFNSLYEPEPEVAADLATALASQRFFFSSPGKSNSLIEYTRQKHSSLVEGNGENKNKKKKKNKVLLFKGSVAVPTYSPDPYSDFRRSMQEMVEARPELMDVNSNWNVLHQLLLSYLALNPKPTHNFILSAFSDLLISLMEVTVS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0174 194 PANTHER TRANSCRIPTION REPRESSOR OFP12 63 190 - -
Lal13g0174 194 ProSiteProfiles OVATE domain profile. 123 187 IPR006458 -
Lal13g0174 194 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 121 189 IPR006458 -
Lal13g0174 194 Pfam Transcriptional repressor, ovate 127 188 IPR006458 -
Lal13g0174 194 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 63 190 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0174 Lal-Chr13 1097827 1098411 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lal13g0174 Ovate 8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0174 - - aprc:113871147 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0174 13 1097827 1098411 Lal13g0174 13 1097827 1098411 ECH
Lal12g0203 12 1466341 1466898 Lal13g0174 13 1097827 1098411 LSH