Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0150 ATGGCTGAAGAAGAATCTAGGATAGATATAGAGGATAATAACATGGAGGAGGTTGAAGTAGCTAACAGAGCAGCTATTGAAAGCTGTCACAGAATTCTTAATATGTTGTCTCAGCCCAAGGATCAGATTCAACAAAGGAGTTTGATGGTGGAAACTGGGGAAGCAGTGGGGAGGTTCAAGAAAGTTGTGTCCTTGCTCCACAATGGTTTGGGTCATGCTAGAATCAGGAAGCTTAAAAAACTTGTCCCCTTTTCCCAAAGTATCCTCTTAGACAACCCAAATTGCCAAAGCAAAACCGTCAACCACTCTAAATATATTCACTTTCCCCAAATCCCAACCAGATTTCCTGAGAATTCAGTTCAGGAATATGGCTCAAGTGTTCGCGACACTCTCTCTCTTGGAAACCCATCTTTGGAATTGAATTCAAGTGTTAAAACTCCCCTCCGGCTTGCACAACAAGCTTCATCGGCACACTATCACTTCCTTCAGCAACAGCAGCAGCAACAAAGGTTGATAGTGCAGCAACAACAAATGAAACATCAAGCGGAAATGATGTACCGAAGGAATAATAACAGTGGCATAAACCTGAACTTTGACAGTAGTAGCTGCACACCAACAATGTCGTCTACGAGGTCTTTCATTTCTTCCTTGAGTATAGACGGAAGTGTACCGAACTTGGATGGAAGCGCCTTTCATTTAATTGGAGCTCCGCCACACTCTTCAGATCAGAATTCGCAACAGCATAAGAGAAAATGTTCTGCCGGAGGTGATGATGGCAGTGTGAAATGTGGGAGCAGTTCTAGATGCCATTGCTCAAAGAAGAGGAAGCATAGAGTGAAGAGATCAATTAAGGTGCCTGCTATCAGCAACAAACTCGCAGATATCCCTCCCGATGACTATTCGTGGCGGAAGTATGGACAGAAACCTATCAAGGGCTCACCTCACCCTAGGGGATACTATAAGTGCAGTAGCTTGAGAGGCTGCCCGGCTAGGAAGCATGTTGAAAGGTGTTTGGAAGAGCCTACAATGTTGATTGTTACCTATGAAGGGGAGCATAACCACCCTAAGCTACCAGAACAATCTGCAAATGCATGA 1095 0.4429 MAEEESRIDIEDNNMEEVEVANRAAIESCHRILNMLSQPKDQIQQRSLMVETGEAVGRFKKVVSLLHNGLGHARIRKLKKLVPFSQSILLDNPNCQSKTVNHSKYIHFPQIPTRFPENSVQEYGSSVRDTLSLGNPSLELNSSVKTPLRLAQQASSAHYHFLQQQQQQQRLIVQQQQMKHQAEMMYRRNNNSGINLNFDSSSCTPTMSSTRSFISSLSIDGSVPNLDGSAFHLIGAPPHSSDQNSQQHKRKCSAGGDDGSVKCGSSSRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSLRGCPARKHVERCLEEPTMLIVTYEGEHNHPKLPEQSANA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0150 364 Gene3D WRKY domain 284 357 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal13g0150 364 MobiDBLite consensus disorder prediction 230 264 - -
Lal13g0150 364 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 363 IPR044810 GO:0003700
Lal13g0150 364 SMART WRKY_cls 296 356 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal13g0150 364 Coils Coil 1 21 - -
Lal13g0150 364 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 16 363 - -
Lal13g0150 364 SUPERFAMILY WRKY DNA-binding domain 294 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal13g0150 364 Pfam WRKY DNA -binding domain 298 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal13g0150 364 Pfam Plant zinc cluster domain 249 294 IPR018872 -
Lal13g0150 364 ProSiteProfiles WRKY domain profile. 291 357 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0150 Lal-Chr13 967017 969914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0150 15 361 WRKY Transcription Factor Family AT2G30590 55.959 2.91e-124 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal13g0150 WRKY 9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0150 - - gmx:100170681 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0150 13 967017 969914 Lal13g0150 13 967017 969914 ECH
Lal12g0176 12 1237421 1240113 Lal13g0150 13 967017 969914 LSH
Lal13g0150 13 967017 969914 Lal24g0138 24 1000127 1003131 LSH