Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0144 ATGGAAGGAAACTATGTGAGCAAAAACACTCATAGAGAGGACCATAGCTTTGGCTTTGAGGAGCATACACGGGGAACTTCATGGCCAGCAAGAAACTATGGTTGTAGCTTTTGCAAGAGAGAGTTCAGGTCTGCTCAAGCATTGGGTGGACATATGAATGTTCATAGAAGGGATAGAGCAAGATTAAGGTCTTCCTTATGTTCATGGGTTTCTGAGTGCCCTAAACCTAACCCTAACACCACAAAGCCTAATAACTCATCTTCTCCTTTATCCGATGAGCTTTTGAATTGCACACATCGCTCTCCACTTTATAGTCCTTATCTCACTCTGCCCTCTTCTGCCAGTGGAGATAAGAAACCAAGACTCGCGTCATCTTCGCAGCAGCTTTCTCCTTTGAGTCCTCAAAGCATGGAAATTAAGATGATGAGTAAGAACACAACAGTGAGTGCTTTTGATATTGAAGATTTGAAGGGTTGTGAAGAGGAGGATGAATGCAGGATTTCCAAGAATTGTAATGAGCATAACCTTACGTTGGAATTGCGAATAGGGTTGCTCAAACAAGAGGAGAAGTTAGATTTGGAACTTCGATTGGGGCATTAA 600 0.425 MEGNYVSKNTHREDHSFGFEEHTRGTSWPARNYGCSFCKREFRSAQALGGHMNVHRRDRARLRSSLCSWVSECPKPNPNTTKPNNSSSPLSDELLNCTHRSPLYSPYLTLPSSASGDKKPRLASSSQQLSPLSPQSMEIKMMSKNTTVSAFDIEDLKGCEEEDECRISKNCNEHNLTLELRIGLLKQEEKLDLELRLGH 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0144 199 Gene3D Classic Zinc Finger 8 82 - -
Lal13g0144 199 PANTHER TRANSCRIPTIONAL REGULATOR SUPERMAN 6 199 - -
Lal13g0144 199 PANTHER OS07G0101800 PROTEIN 6 199 - -
Lal13g0144 199 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Lal13g0144 199 MobiDBLite consensus disorder prediction 113 135 - -
Lal13g0144 199 Pfam C2H2-type zinc finger 33 57 - -
Lal13g0144 199 SUPERFAMILY beta-beta-alpha zinc fingers 30 59 IPR036236 -
Lal13g0144 199 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0144 Lal-Chr13 939311 939910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0144 4 198 C2H2 Transcription Factor Family AT3G23130 39.000 1.10e-25 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0144 - - gmx:102660985 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0144 13 939311 939910 Lal13g0144 13 939311 939910 ECH