Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0143 ATGGATTTTGCAAGTGGAAATGGCACTGGCTCTAGCACTGGATCTCCATGTGGGGCATGCAAGTTCCTTAGACGAAAGTGTGCACCTGATTGTATATTTGCTCCTTACTTTTCTTCTGAACAAGGGTCTGATAGATTTGCTGCTATACATAAAGTGTTTGGTGCTAGCAACGTTTCAAAGTTGCTCTTGCATATACCAGCTAATGATCGATGTGAAGCTGTAGTTACAATTACTTATGAAGCACAAGCTCGTATAAGAGACCCTGTTTATGGTTGTGTCTCCCATATTTTTGCCTTACAACAACAGGTGGCATGCTTGCAGGCTCAACTGATGCAAGCAAAGGCACAAGTGGCACATCAAAACCTGATAGAGAATCAGTGGTCAGGGAATGGTACTGGAGTATCAACACTCAATCCATTTGGTCCAACTTCCATGATGAATCCTATATCTCCACAGAGTTCATTTGAGTCATCAATTGATCATAGAAGCACCAGTGATGGAATGAGCATGCAAGATATGCAAAGCAGAGAAGATTCCTCATTCCAAGATTGGGCTAAGAAAATATCATATAACAATGACTTTGGTGAGCTCCAAGATTTGGCACTCAGGATGATGCAGAGGAACTATTACTAG 633 0.4171 MDFASGNGTGSSTGSPCGACKFLRRKCAPDCIFAPYFSSEQGSDRFAAIHKVFGASNVSKLLLHIPANDRCEAVVTITYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQAKAQVAHQNLIENQWSGNGTGVSTLNPFGPTSMMNPISPQSSFESSIDHRSTSDGMSMQDMQSREDSSFQDWAKKISYNNDFGELQDLALRMMQRNYY 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0143 210 MobiDBLite consensus disorder prediction 151 176 - -
Lal13g0143 210 Coils Coil 96 116 - -
Lal13g0143 210 ProSiteProfiles LOB domain profile. 15 117 IPR004883 -
Lal13g0143 210 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 10 206 - -
Lal13g0143 210 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 206 - -
Lal13g0143 210 Pfam Lateral organ boundaries (LOB) domain 16 114 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0143 Lal-Chr13 933901 935644 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0143 4 206 AS2 family AT2G42430 53.086 2.16e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal13g0143 LOB 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0143 K13944 - gmx:100801508 278.87