Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0121 ATGCCGCCTGAATCGTTGCATTGGGATCGAAAGGAGTTTTTGAAAGAGAGGAAACATGTGAGGTCTCAATCTTTGGGTTCTCTTGCAAGATGGAGAGATTCTTCTTATCATCGACACTTCACTCGCTGGGCTTCCCCTGACTTTCGCACAACACCAGGTCATGGTAAGCAGGGCGGTTGGCACCTTTTTCCCGAAGAATCCGGTCATGGGTATGGGGTTTCTCGGTCCAGAGACAAGATACTGGAGGCTGATATTAAGCAATCATCAGTTTCACGTGGGGATGGAAGATATGGCAAGTACAATAGGGAAAATAGAGGATCCTTTGGCCAGAGATATTGGAGAGGGCATTCATTGGAAACCACCAACAGCTCTCTGAATATGTCCAGGAGACCACCTGATGTGAAAAATGACCAGAGGTCAGATGTTGCCCTAACATATTCCTCTCATTCACATTCTGATTTTGTAAACACTTGGGATCAGCACCACTCGAAAGACCAACATGATAATATGTGTGGTGTAAATGGGTTCGAAACAGGCCCGAGATGCGGTAGAGGGAAATCTCTGGGTTCAGTTGAATGGATGCCACTTAAATGGACCAGATCTGGAGGCTTATCATCACGAGGCCCAGGTTTTCGTCATTGTAGTAGGTCAAGGAGCATGGGAGGGGAAGATTCATATGAAGCGAAGATTGAGTCACAACCCAAAAATGGGACTACTAATGAGTCGCATTCAAGCAAAGCTGCTGCTTGCGTGACTTATTTGGCACCATCTGACGATAAAACTTGTCGAAAGAAACCTAGGCTGAATTGGGGTGAGGGACTTGCTAAGTATGAAAAGAAAAAAGTTGATGGGCCTGATGTTTGTACAAACAAAGGTAGTCCTGTCAGTAATATGGGACCTTCTAATAATCTCAGTCCTCATAACGCAGTACATAAAAGCCCGAAAGTTTCAGGATTTTCAGAATGCGCGTCTCCCGCAACTCCTCCTTCTGTTGCTTGCATTTCCTCCCCAGGATTTGAACCTATGACCTCCAGTTCACAAGGCAGACAACCTTATAGTTGTGCCGAGGCTCACTCTCTTGGTGTGGGTGATAAATTATTTGGAAAGACTGCAACTGTGGACAATGATGTCAATAACTTGACTGTTTCAGCTGTTCCTGGGTTCCAAGATCATCTGCAGAGGTTTTCTTTTAATTTAGAGAAATTGGATATTGACTCCTTGAGTGATATGGGAGCTTCAATTACCGAATTGATACAGTCTGATGATCCACGTTCTGTGGATTCTGGTCCGGTGAGTTCAAGTGCAATGGATAAGTTGCTGATATGGAAAGCTGACATTTCAAAGGTACTAGAGAGAACTGAATCTGAAATTGATTCACTTGAAACTGAATTGAAGTCTCTAAAATCTGAATCTGGGGATAGGTGTCTGTGTCCAGCACCAGCATTGGGCTCCCAGCTGGTATGTAACAATGAAAAACCATGTGAAGAATATGCTGTAGTCTCTGATAAGGTCCCTTGGCCAGAACCCTTAAAAATTATTTCTTCAGGTGACCTCCTTGTGGACAAGAGGACTCTGTCAACTAATTTACATAGTAGTCATGAAAATGACAAGGAGGGAGACATTGATACTCCTGGAACATCAACATCTAAATTTGAAGAGCCTCTGCCTTTGACTAAAGTAGTTTCTTCATGTGATACTAAGACATATGATAACTTCTCCGGGTATTTGGATGCTATGCAGTCTACAGGCGTGAAATGCTTAGGTCCGTGTGCTACTAAGGAAGTTACCAGTTTATCTGCTTGTGGTGATGGCAATACTTCTATGGAAGCAAAAGATGGCATGGATGCTAGCTCTGGTTCCAGCTTATGTCTTAGCAGTGAGGATATTTTATATAATACAATTATTTCTTCCAACAAAGAATCTGCAGACAGAGCATGTGAAGTATTTGCTAATTTATTGCCTAAAGAATGTTGTGAGATTGGTAATACAGGAGGTAGCAGTGACTCATTATCCCATACAATCATTATGGAAAAGTTTGCGGAGAGAAAACTGTTCGCAAGATTTAAGGAGAAAGTTGTCACACTTAAGTTCAAAGCATTGCGGCAGCTGTGGAAAGAAGATATGCGGTTACTGCACATGAGGAAAGGCCGCCCAAAATCTCACAAGAGACATGAACTTAGTGTGCGATCTACCTGTAATGGTATTCGGAAGAATCGATCCGCCATTCGTTCCCATTTTTCGTTTCCCGGAGATCATATAAGCTTGGTTCCAACTTCTGAGATACTTAACTATACAAGCAAACTGCTTTCAGAGCCTAAAGTTGACGTTCAAAGAAACACCCTGCAAATGCCAGCTTTAATTTTGGATGAGATGGAAAAGATGGTTTCTAAGTTCATATCTAGCAATGGGCTTGTTGAAGATCCTTTGGCTATTGAGAAAGAAAGGACAATGATCAACCCTTGGACGGCAGTAGAGAGAGAAATTTACTTGGACAAATATGCTGTTTTCGGAAAAGATTTTCGGAAAATTGCTTCTTTCCTTGACCACAAAACAACTGCTGACTGTGTAGAATTCTACTACAAAAATCATAAGTTTGAGTGTTTTGAAAAATTTAAGAAGCAATATGTTGGTAAACTAGGGAAGTCTTTTTCAGCTAAAACTGACATGATGGCGTCAGGCAGAAAATGGAATCATCAAGTAGATGCTGCTTCACTCGAGATTTTGAGTGCAGCTTCAGTGATGGTGGATGGCATATCTAGTAATAAAAGAATCCGTGCAGGAAGTCTACTTTTGCGGGGATATGGTAATGTAAATGCATCAAGGGCTGATGATAGCATCACAGACAGATCTGCCAAATTTGATATTATTGAGGATGAACGAGAGACTGTTGCAGCTGATGTATTGGCTGGCATATGTGGTACTATATCATATGAGGCTAGCATAACAAGTTCAGTTGATCTTGTTGAAGGTAGTATGGATAGGAAGTTCCTAAAAGCAAAACCTTTATGTGAACAACCCCTGATACCTGATGTTACTCAGAATGATGATGATGGGACTTGTTCAGATGAGAGCTGTGGTGAAATGGATCCTACCGAGTGGACAGATGAAGAGAAGGCTTCCTTTCTTCAGGCTGTATCATCCTTTGGTAAGGATTTCACGAAGATATCACAGTGTGTAGGAAGAAGGTCTCAAGAGCAGTGCAAAGTTTTCTTCAGCAAGGCTCGGAAATGCCTTGGATTGGAGCTCATGCATTCTATATCTGAAAATGCTGGATCCCCAGTAAATGATGATGTCAATGATGGTGGGAGTGGAACAGATGATGGAGGTGTTGTAGAGACATGCTCGGCAGATGGCACCGATAAGTCCGGCATGAAAACAGATGAGGACCTTCCTTCTTTTGTCATGAACACATACCATGATGATTCCCCTGCTGTGGAAGGTAGGAAGCTGTCAGTTGAATTGAAAAAATTAAAGGAAATTAATGGGGCAGAAGTAGATCATGAAGATGTAAATGTGGTTTCTGATGCTTGTGCAAGTAAGACTGAACCTAAAGTGGGCTCTGGTGGCAGTGATGTTATGCTGTACAGTTCTGTTAAGTCATGTTCAGTCAGTGGGAAGGCAGCTATAATTATGTCAGATAACACTGAGGTTGGAAAAGGGAAAGCAGATAAAACTGGAGGTGCAACTACTGAGTTGATTTCTGCTCAAGAGATATTTGAACCGTGCAAGTCTAATTCTGTTGATGAGGATAGACTGGTTTCTGATGTTTTTTCTGAGGGTCCTGGAAATGAATTGGGGAGGCAGAGAATGACTTCAGTCCAATGTCTTGATGATAGAGACGATAAACGTGAAGCTGATACAGGTGCTGTAGCTGAACTGAAATGTTCAGTGCATGGTTCAAGTACAACAGCACATGCTTCAATCTCATCTGTGGGCAATTCCTGCTCATTATTGAGTTTTGATACTGAAAATAAACATGTTTCCCTTGGAAGGCCCCATATGTCAGCATTTTCATCTGAGGACCATCATGCAACTGCAAATTCATTGTTGCAAAATACTGCTGCTGCTAATGTTAAATGTAAGAAAATAGCTGTCCAAGATCGATTGTCTTCCACTTCTGATTTTCAGGGAAGTACAAATATGCATTGTCATAGTTCCATTGGCAATGGCGACCATCAGCTTCCTATTCCTGGTAACCATGTTGAGGCTATTAGCATCCTACGTGGCTATCCCTTGCAAGCTCCCATCAAGAAAGAAGTGAGCGGGGATATGAATTGCAGCAGTTCAACCACTGAGTTGCCTCTTCTGTCCAAAAATGATGAACAAGCAGATCATCAATTCAAAACAAGGTTACAGCATTTGTTGGGTTCAGAAAAAACATCTAGAAATGGTGATGTGAAACTTTTTGGAAAGATATTAACCAATCCTTCATCCTCCCAGAAACCTAATTTGACTTCCAAGGCAAGTGAAGAAAAGGGCATCCATCATTCCAAGTTAAGCAGCAAGACTTCCGGTCATAAGTTTTCTGGTCATCACAATGATTATGAAAATTTGAAAATTTTGAAGTTTGACCATAATGACTACCTGGGCCATGAAAATGTTCCTCTGAGGAGTTATGATAATAGGGATGGGAATGGAGTACAGACTTGTCTCTCATCATTGCCAGATTCTGCCATCTTGCTAGCAAAGTATCCTGCTGCTTTTGGTAATTATTCTACATCTTCTGCTAAATTGGAGCAACAGTCATTGCAGGCATTTGCCAGGAATAATGAACGACATGTGAATGGTGCATTTTCTTTTACAACTAGAGACACCAATGGCAGCAATGCTTTGATTGATTATCAGATGTTTAGAAGTCGGGATGGTCTAAAGGCGCAGCCATTTATGGTAGATGTGAAGCACCGTCAAGATTTGTTCTCTGAGTTGCAGAGACGAAATGGCTTTGAAGCAATCTCTACTTTACAGCATCAGGGGAGAGGCATGGTGGGAATGAACAGCATTGGAAGACCAGGGATACTTATGGGAGGGGTTTCAGATCCTGTGGCTGCAATCAAAATCCATTATTCCAATTATGACAAGTATGGTGGTCCAGGTCAATCTGGGAGCATCATAAGAAATAATGAATCTTGGGGAGGAAAAGGGGATCTGGGCAGGTAG 5157 0.4194 MPPESLHWDRKEFLKERKHVRSQSLGSLARWRDSSYHRHFTRWASPDFRTTPGHGKQGGWHLFPEESGHGYGVSRSRDKILEADIKQSSVSRGDGRYGKYNRENRGSFGQRYWRGHSLETTNSSLNMSRRPPDVKNDQRSDVALTYSSHSHSDFVNTWDQHHSKDQHDNMCGVNGFETGPRCGRGKSLGSVEWMPLKWTRSGGLSSRGPGFRHCSRSRSMGGEDSYEAKIESQPKNGTTNESHSSKAAACVTYLAPSDDKTCRKKPRLNWGEGLAKYEKKKVDGPDVCTNKGSPVSNMGPSNNLSPHNAVHKSPKVSGFSECASPATPPSVACISSPGFEPMTSSSQGRQPYSCAEAHSLGVGDKLFGKTATVDNDVNNLTVSAVPGFQDHLQRFSFNLEKLDIDSLSDMGASITELIQSDDPRSVDSGPVSSSAMDKLLIWKADISKVLERTESEIDSLETELKSLKSESGDRCLCPAPALGSQLVCNNEKPCEEYAVVSDKVPWPEPLKIISSGDLLVDKRTLSTNLHSSHENDKEGDIDTPGTSTSKFEEPLPLTKVVSSCDTKTYDNFSGYLDAMQSTGVKCLGPCATKEVTSLSACGDGNTSMEAKDGMDASSGSSLCLSSEDILYNTIISSNKESADRACEVFANLLPKECCEIGNTGGSSDSLSHTIIMEKFAERKLFARFKEKVVTLKFKALRQLWKEDMRLLHMRKGRPKSHKRHELSVRSTCNGIRKNRSAIRSHFSFPGDHISLVPTSEILNYTSKLLSEPKVDVQRNTLQMPALILDEMEKMVSKFISSNGLVEDPLAIEKERTMINPWTAVEREIYLDKYAVFGKDFRKIASFLDHKTTADCVEFYYKNHKFECFEKFKKQYVGKLGKSFSAKTDMMASGRKWNHQVDAASLEILSAASVMVDGISSNKRIRAGSLLLRGYGNVNASRADDSITDRSAKFDIIEDERETVAADVLAGICGTISYEASITSSVDLVEGSMDRKFLKAKPLCEQPLIPDVTQNDDDGTCSDESCGEMDPTEWTDEEKASFLQAVSSFGKDFTKISQCVGRRSQEQCKVFFSKARKCLGLELMHSISENAGSPVNDDVNDGGSGTDDGGVVETCSADGTDKSGMKTDEDLPSFVMNTYHDDSPAVEGRKLSVELKKLKEINGAEVDHEDVNVVSDACASKTEPKVGSGGSDVMLYSSVKSCSVSGKAAIIMSDNTEVGKGKADKTGGATTELISAQEIFEPCKSNSVDEDRLVSDVFSEGPGNELGRQRMTSVQCLDDRDDKREADTGAVAELKCSVHGSSTTAHASISSVGNSCSLLSFDTENKHVSLGRPHMSAFSSEDHHATANSLLQNTAAANVKCKKIAVQDRLSSTSDFQGSTNMHCHSSIGNGDHQLPIPGNHVEAISILRGYPLQAPIKKEVSGDMNCSSSTTELPLLSKNDEQADHQFKTRLQHLLGSEKTSRNGDVKLFGKILTNPSSSQKPNLTSKASEEKGIHHSKLSSKTSGHKFSGHHNDYENLKILKFDHNDYLGHENVPLRSYDNRDGNGVQTCLSSLPDSAILLAKYPAAFGNYSTSSAKLEQQSLQAFARNNERHVNGAFSFTTRDTNGSNALIDYQMFRSRDGLKAQPFMVDVKHRQDLFSELQRRNGFEAISTLQHQGRGMVGMNSIGRPGILMGGVSDPVAAIKIHYSNYDKYGGPGQSGSIIRNNESWGGKGDLGR 1718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0121 1718 ProSiteProfiles SANT domain profile. 816 868 IPR017884 -
Lal13g0121 1718 MobiDBLite consensus disorder prediction 202 226 - -
Lal13g0121 1718 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1689 - -
Lal13g0121 1718 Pfam Myb-like DNA-binding domain 1032 1072 IPR001005 -
Lal13g0121 1718 MobiDBLite consensus disorder prediction 529 552 - -
Lal13g0121 1718 Gene3D - 797 869 - -
Lal13g0121 1718 CDD SANT 1032 1071 IPR001005 -
Lal13g0121 1718 SUPERFAMILY Homeodomain-like 1030 1079 IPR009057 -
Lal13g0121 1718 SMART sant 1029 1077 IPR001005 -
Lal13g0121 1718 SMART sant 817 865 IPR001005 -
Lal13g0121 1718 ProSiteProfiles SANT domain profile. 1031 1079 IPR017884 -
Lal13g0121 1718 MobiDBLite consensus disorder prediction 1472 1487 - -
Lal13g0121 1718 MobiDBLite consensus disorder prediction 529 543 - -
Lal13g0121 1718 Gene3D - 1007 1088 - -
Lal13g0121 1718 SUPERFAMILY Homeodomain-like 804 865 IPR009057 -
Lal13g0121 1718 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1689 - -
Lal13g0121 1718 Coils Coil 443 470 - -
Lal13g0121 1718 MobiDBLite consensus disorder prediction 1472 1507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0121 Lal-Chr13 756168 764359 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal13g0121 Myb_DNA-binding 2.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0121 - - gmx:100810588 2151.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0121 13 756168 764359 Lal13g0121 13 756168 764359 ECH
Lal12g0143 12 985015 996577 Lal13g0121 13 756168 764359 LSH