Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0116 ATGGGGAGGAAAGGGAGTTGGTTTTCTACAGTGAAGAAGGCTCTTAATGGTTCAGATTCCAGAAAAAAACAGAAACAAAAACAGAAATACAACAAGTCAAGTCTAGGATGTTTTGGGTATCATGAGGCACTTGAACCAGGATCTGAAGAAGCAAGAGCACCAGTTGCTGTTGTTCCCTCTCTTCCACCTAGAAAAGATGTTGTTGTTAAACCAAGTGAGACAGAGAATGTACAGAGCAAGCAAGCTTTGTCTTTGGTTTTAGCCACTGCTGTTGTTGCAGGGGCTGCTGTTGCTGCAACTGCAGAGGTTGCACGCCTCAACACCATCTCTCGGTATGCTGGAAAATCCAGGGAAGAAGTATCAGCTATCAAGATTCAGACCGCGTTCCGTGGATATTCGGCAAGAAGATTATTGCGTGGGATGAGAGGATGGGTGAGGTTGAAAAGGTTGATACAAGGGCAATCAGTTAAACGGCAAACAGCTACAGCCTTAAAATGCATGCAAACCTTTTCACGGCTGCAGTCTCAGATTCACGCGAGGAGGATTAGAATGTCTGAGGAGAACCAAGCTCTTCAGCGCCAACTCAATCAAAAACGTGAAAAGGAGCTTGAGAAGTTGCTAGCTGCTGTAAGCATTTTATGTATATTTGCTTGTTATAGTGCAGTTTATGGTGCAAATGCAATGCATGTTATTAGAGTGGACTTGCCAGTGATATCTGCAGATACAATTGTGTTTTTGTTTCGTAGAAAGGTTGCAGAAAAATGGGATGCTAGCTTGAAGTCAAAAGAGCAAGTTGAAGCAAAAATGTTGCATAGGCAAGTAGCTGCTATGAGAAGAGAGAAGGCTTTGGCCTATTCATTATCCCATCAGCAAACGTGGAGGAACTCTCCAAAATCGGCAAATGCCACATTTATGGATCCAAACGATCCTCATTGGGGCTGGAATTGGCTAGAGCGATGGATGGCTTCGCGACCATGGGAAGGGCAAATCATTATGCAACACAATGATCATACATCTGCAAAGAGTGCTTCAAGTTACGCTACAATGTCAGTAGGGGAAATCACCCAATTGTATTCTCTCCGCGACCAGAACAATCATGATAGTAAGAATGATTCTCCTGCTACTAACCAAAAAGCGAGCCGTGTTCACAGTCACACAAATCCCCCTTCAGCTTCAAAGGCTATATCAAAAGTGAAGGCATCAATAAGCCAGGGTGGTTCATGGGGTGGTAATGGTGATGACTCAAGAAGCATGTTTAGAATAAACCACGAAAGCAACCGCAGGCATAGCATTGCGATATCTTCTGTTAGAGATGATGGGAGCTTTGCAAGTTCACTTGCATTTCCAACTCATACACCATCCATAAAAGTGGCAAAGTCCAAGTCCCAAATTCCAAATCCATTTAACACTAAAGGAACAATACTTGAAAAAGGAGGTGTGGTTTCTGCAAAGAAAAGGCTTTCTTTCTCACCCTCTCCATCTGGTGCTAGAAGACATTCTGTTTCAGCTAAGAGTGTTGCTAATGCTACAATCCCTGAAGAGAATGAAAAAGTGAAAATCAAAGTGATAAATTGA 1575 0.4292 MGRKGSWFSTVKKALNGSDSRKKQKQKQKYNKSSLGCFGYHEALEPGSEEARAPVAVVPSLPPRKDVVVKPSETENVQSKQALSLVLATAVVAGAAVAATAEVARLNTISRYAGKSREEVSAIKIQTAFRGYSARRLLRGMRGWVRLKRLIQGQSVKRQTATALKCMQTFSRLQSQIHARRIRMSEENQALQRQLNQKREKELEKLLAAVSILCIFACYSAVYGANAMHVIRVDLPVISADTIVFLFRRKVAEKWDASLKSKEQVEAKMLHRQVAAMRREKALAYSLSHQQTWRNSPKSANATFMDPNDPHWGWNWLERWMASRPWEGQIIMQHNDHTSAKSASSYATMSVGEITQLYSLRDQNNHDSKNDSPATNQKASRVHSHTNPPSASKAISKVKASISQGGSWGGNGDDSRSMFRINHESNRRHSIAISSVRDDGSFASSLAFPTHTPSIKVAKSKSQIPNPFNTKGTILEKGGVVSAKKRLSFSPSPSGARRHSVSAKSVANATIPEENEKVKIKVIN 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0116 524 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Lal13g0116 524 MobiDBLite consensus disorder prediction 487 507 - -
Lal13g0116 524 Coils Coil 181 204 - -
Lal13g0116 524 MobiDBLite consensus disorder prediction 363 411 - -
Lal13g0116 524 MobiDBLite consensus disorder prediction 1 31 - -
Lal13g0116 524 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 250 506 - -
Lal13g0116 524 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 209 - -
Lal13g0116 524 MobiDBLite consensus disorder prediction 486 507 - -
Lal13g0116 524 PANTHER IQ-DOMAIN 5-RELATED 250 506 - -
Lal13g0116 524 PANTHER IQ-DOMAIN 5-RELATED 1 209 - -
Lal13g0116 524 Pfam IQ calmodulin-binding motif 121 139 IPR000048 GO:0005515
Lal13g0116 524 MobiDBLite consensus disorder prediction 363 418 - -
Lal13g0116 524 SMART iq_5 117 139 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0116 Lal-Chr13 729547 734070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0116 1 504 IQD Protein Family AT5G03040 39.494 7.90e-95 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0116 - - lang:109335166 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0116 13 729547 734070 Lal13g0116 13 729547 734070 ECH
Lal12g0138 12 969647 973552 Lal13g0116 13 729547 734070 LSH