LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal13g0114	ATGAGCGGAACAGTGAAGAAAGTGACAGATGTAGCATTCAAGGCTGGTAAGAGCATCGATTGGGATGGAATGGCGAAAATTCTTGTATCAGATGAGGCTCGCAAGGAATTCTCTAATCTCCGTCGTGCTTTTGATGAGGTTAATTCTCAACTCCAAACCAAATTCAATCAGGAGCCTGAGCCCATAGACTGGGATTATTATAGAAAAGGAATTGGAAATCGTTTGGTGGATATGTACAAGGAGCACTATGACAGCATAGAGGTCCCCAAGTTTGTTGACAATGTTACTCCTCAATATAAGCCTAAATTTGATGCGCTATTAGTTGAGCTTAAGGAAGCGGAGCAGAAATCTTGGAAGGAGTCTGAGTGTTTGGAAAAGGAAATTGCTGATGTACAGGAGTTGAAGAAAAAGCTCAGTACCATGACAGCAGATGAGTACTTTGAAAAGCATCCAGAGCTGAAGAAGAAGTTTGATGATGAGATCAGGAATGACTACTGGGGCTATTGA	507	0.4181	MSGTVKKVTDVAFKAGKSIDWDGMAKILVSDEARKEFSNLRRAFDEVNSQLQTKFNQEPEPIDWDYYRKGIGNRLVDMYKEHYDSIEVPKFVDNVTPQYKPKFDALLVELKEAEQKSWKESECLEKEIADVQELKKKLSTMTADEYFEKHPELKKKFDDEIRNDYWGY	168

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal13g0114	168	Pfam	ATP synthase D chain, mitochondrial (ATP5H)	15	166	IPR008689	GO:0000276\|GO:0015078\|GO:0015986
	Lal13g0114	168	Coils	Coil	121	144	-	-
	Lal13g0114	168	Gene3D	-	14	133	IPR036228	GO:0000276\|GO:0015078\|GO:0015986
	Lal13g0114	168	Coils	Coil	30	50	-	-
	Lal13g0114	168	PIRSF	Mitoh_ATP-synt_D	9	168	IPR008689	GO:0000276\|GO:0015078\|GO:0015986
	Lal13g0114	168	SUPERFAMILY	ATP synthase D chain-like	15	132	IPR036228	GO:0000276\|GO:0015078\|GO:0015986
	Lal13g0114	168	PANTHER	ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL	1	168	IPR008689	GO:0000276\|GO:0015078\|GO:0015986
	Lal13g0114	168	PANTHER	ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL	1	168	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal13g0114	Lal-Chr13	718885	720995	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal13g0114	K02138		-	gmx:100306184	314.694

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal13g0114	13	718885	720995	Lal13g0114	13	718885	720995	ECH
	Lal13g0114	13	718885	720995	Lal24g0775	24	6016215	6024186	LSH