Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0113 ATGATGAAAAGCACAACAACTCCTCCTCCATCAACCCAAATGATAAACCATTTCCCCAGCACCATGCTTTCAAATTATTCTAACTCTCCTCCATCTTCATCTTCTTCACCTCCTTCACTATCTCATTCACTTTCACCTTCTCAATCTCCTCCAACATCAGCTATGCCTCCTCCTCCTCCTCCACCACTTGTGGTGGTTAGCCCTTGTGCTGCCTGCAAGATTCTCCGCCGGAGGTGTGTGGATAAGTGTGTCTTGGCTCCTTACTTTCCTCCTACTGATCCACTCAAGTTTACCATTGCTCATAGAGTCTTTGGAGCAAGTAACATCATCAAGTTCTTGCAGGAACTACCAGAATCACAAAGAGAAGATGCAGTAAGCAGCATGGTATATGAAGCAAATGCTAGGATCAGAGACCCAGTGTATGGGTGTGCAGGTGCAATATGCCAACTTCAAAAGCAAGTTAGTGAGCTACAAGCACAACTAGCAAAAGCACAAGCTGAGGTAGTCAACATGCAATGCCAACAAGCTAATTTAGTTGCACTAATTTGCATGGAAATGGGTCAATCACAAGACCAGAACATGCTTCAGCCTCAACCTAATGATGATGATGATATGAACTGCTTCTTAGATGACACAGATTTTGGCTCTGCTTGGGAGCCTCTATGGACATGA 672 0.4435 MMKSTTTPPPSTQMINHFPSTMLSNYSNSPPSSSSSPPSLSHSLSPSQSPPTSAMPPPPPPPLVVVSPCAACKILRRRCVDKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQREDAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALICMEMGQSQDQNMLQPQPNDDDDMNCFLDDTDFGSAWEPLWT 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0113 223 Coils Coil 147 174 - -
Lal13g0113 223 ProSiteProfiles LOB domain profile. 67 168 IPR004883 -
Lal13g0113 223 MobiDBLite consensus disorder prediction 1 59 - -
Lal13g0113 223 MobiDBLite consensus disorder prediction 1 49 - -
Lal13g0113 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1-LIKE 50 214 - -
Lal13g0113 223 Pfam Lateral organ boundaries (LOB) domain 68 165 IPR004883 -
Lal13g0113 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 50 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0113 Lal-Chr13 714401 716866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0113 64 223 AS2 family AT1G07900 69.697 2.70e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal13g0113 LOB 1.9e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0113 - - gmx:100806667 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0113 13 714401 716866 Lal13g0113 13 714401 716866 ECH