Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0111 ATGTCTGGGAACTCAAATTGCACTGTTTACATTGGTAATCTGGATGAGAGGGTGACAGACAGGGTCTTGTATGATATCCTGATTCAGGCAGGACGAGTGGTAGATTTGCACATTCCTAAAGATAAGGAAACAGATAAACCAAAAGGTTTTGCCTTTGCAGAATATGAAACCGAGGAGATCGCAGACTATGCTGTCAGGCTTTTCTCAGGCCTTGTGACACTCTACAACAGAACACTGAAGTTTGCGATATCTGGGAAAGACAAAACTACCTCTAAAGGTTCTACTGCTATTACACCCACATCAAATTCTTCTCAGCGACCAAGGCCTTACCCAATGCCTATAAATAACTCAGAAAATTTTCCACACTCCAATAGACTATCAACTCCTGACCGGTTTTCAGATTATTCTGTGAATCATTCCCAAGTTCCTCCTCTTCGTGTGACTGACCAATCTAGTGGGTATGGATCTCACCACACTACTAACAATTATGAATACAGTCGGAGAGCTTTTGGTGGAACATCAGATAGCATTAGCCATTCTAGGTCACGCCGCTATGAGAGAAGTAGCCCAATCACATACCCATCTTACTAA 591 0.4247 MSGNSNCTVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKETDKPKGFAFAEYETEEIADYAVRLFSGLVTLYNRTLKFAISGKDKTTSKGSTAITPTSNSSQRPRPYPMPINNSENFPHSNRLSTPDRFSDYSVNHSQVPPLRVTDQSSGYGSHHTTNNYEYSRRAFGGTSDSISHSRSRRYERSSPITYPSY 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0111 196 MobiDBLite consensus disorder prediction 87 196 - -
Lal13g0111 196 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 80 IPR000504 GO:0003723
Lal13g0111 196 SUPERFAMILY RNA-binding domain, RBD 4 84 IPR035979 GO:0003676
Lal13g0111 196 SMART rrm1_1 8 82 IPR000504 GO:0003723
Lal13g0111 196 Gene3D - 2 97 IPR012677 -
Lal13g0111 196 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 86 IPR000504 GO:0003723
Lal13g0111 196 MobiDBLite consensus disorder prediction 87 178 - -
Lal13g0111 196 PANTHER OS01G0876500 PROTEIN 1 196 - -
Lal13g0111 196 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 1 196 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0111 8 92 Eukaryotic Initiation Factors Gene Family AT1G49760 29.412 1.11e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0111 K12831 - gmx:100803118 340.502