Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0105 ATGACACTAACCCAAATTTCTGAGAGATCATCAATGATTATGGAATCATGTGTACCTCCAGGATTTAGATTTCATCCAACAGAAGAAGAACTTGTGGGATATTATCTCAAGAGGAAGATAAACTCACTAAAAATCGACCTAGATGTCATTGTTGAGATTGATCTCTATAAAATTGAACCATGGGACATACAAGGTAGAGGACTTGATCTGTCATTTATAGATAGATGCAAGCAAGGATATGAGGAACAAAATGAGTGGTACTTTTTCAGCCACAAAGACAAGAAGTATCCAACAGGGACAAGAACTAATAGAGCTACTGCTGCTGGGTTCTGGAAAGCAACAGGAAGGGACAAAGCTGTGATGTCCAAAAACAGAATAATAGGAATGAGGAAGACACTTGTCTTCTACGAGGGTCGTGCCCCAAATGGAGGGAAAACTGATTGGATAATGCATGAGTATAGGTATCAAACCTCTGAGCATGCTCCTCCACAGGAAGAAGGATGGGTTGTGTGCCGAGCATTTAGAAAGCCTATTCCAAGTCACAGGCCAGGTTTTGAACCATGGTGTGGTAACCAACAACCACATTATTTCAGAGATCAAAGCTATGCAAGACCATTAACATTTGCAGATATTTTAAATGAAACTCATAATAATGTGCTTCAATCTGCTGAAGGTTCAAGTTTTAATAGTATTATCCCCTTTAACTCAGAACAGCAAGAGTTTCTACCAAACCATACTGCTATTATGGATAAAAAACAACTGATTGAGCTTCCACAGCTACATAGTCCCACTGCTTCTCTATCAGCAAATATGGCAATAAAAGAATGCAACCAATTACAACACCATAATGGTCTAACAAATGAAGAATATTGTAGTGATGAAAGGTGCAATAATAGTAACAATGGACAAGTTGGTGGTGTTGATTGGAAAAGCTTGGATAATTTGTTTGCTTCACAGTTAACAGATTCTTCAGCTTACTTTACACATCAAAACTTACCCTTGATGATGCCACATAGCCATGAACTACAACCTCAAAATCAAGCTAGTCATATCCTAGGATGCTTTCCTGATTCATAA 1077 0.3825 MTLTQISERSSMIMESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKIEPWDIQGRGLDLSFIDRCKQGYEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIGMRKTLVFYEGRAPNGGKTDWIMHEYRYQTSEHAPPQEEGWVVCRAFRKPIPSHRPGFEPWCGNQQPHYFRDQSYARPLTFADILNETHNNVLQSAEGSSFNSIIPFNSEQQEFLPNHTAIMDKKQLIELPQLHSPTASLSANMAIKECNQLQHHNGLTNEEYCSDERCNNSNNGQVGGVDWKSLDNLFASQLTDSSAYFTHQNLPLMMPHSHELQPQNQASHILGCFPDS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0105 358 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 16 334 - -
Lal13g0105 358 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 334 - -
Lal13g0105 358 Pfam No apical meristem (NAM) protein 19 154 IPR003441 GO:0003677|GO:0006355
Lal13g0105 358 Gene3D NAC domain 27 178 IPR036093 GO:0003677|GO:0006355
Lal13g0105 358 ProSiteProfiles NAC domain profile. 18 176 IPR003441 GO:0003677|GO:0006355
Lal13g0105 358 SUPERFAMILY NAC domain 10 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0105 Lal-Chr13 656615 660225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0105 13 358 NAC Transcription Factor Family AT1G71930 53.073 2.38e-115 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal13g0105 NAM 2.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0105 - - gmx:100811057 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0105 13 656615 660225 Lal24g0102 24 684101 692804 LSH