Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0085 ATGGAAAATAGTGTTGTTACCACTGTGTTATTATTGTTGTTCTGCCTCACCGTGACAAAGATAGAAGTAACTTGTCTCTCACCTGATGGACAAGCCCTTCTTTCACTTAAGTCATCACCTTCTGTTCTCTCCTCATGGAACCCTTCAACCTCAACACCATGTTCATGGAATGGAATCACTTGCTCTCCACAAGGTAGAGTTCTTTCTCTCTCTATTCCAGATACTTTTCTTAACATTTCCACTTTGCCTCCTCAGCTCTCATCTCTATCAATGCTTCAACTTCTCAACCTCTCTTCCACCAATGTCTCTGGTTCCATTCCACCCTCTTTTGGCCAACTATCACATCTTCAACTCCTTGACCTTTCCTCAAATTCACTCACCGGTTCCATTCCTGATGAACTTGGAAGGCTTTCTTCCCTTCAGTTTCTTTTCTTGAACTCTAACAGATTAACAGGAACCATTCCTCAACATCTTGCTAATCTAACCTCTCTTCAAGTTCTGTGCCTTCAAGACAATCTCCTCAACAGTTCAATCCCATCACAGTTAGGCTCTTTGATATCTCTTCAGCAGTTTAGGATAGGTGGTAATCCATATCTCACAGGACAAATTCCTTCACAGTTAGGCCTACTATCCAACCTCACCACATTTGGTGCAGCAGCCACTGGACTTTCAGGTTCCATTCCCTCTACATTTGGTAACTTGATTAATCTCCAAACATTAGCACTTTATGATACTGAAATTTCTGGTTCAATACCTCCAGAACTTGGTTTGTGTTCTGAGTTGAGAAATCTTTATTTGCACATGAATAAGCTCACTGGCTCTATCCCTCCTGAACTGAGTAAGTTGCAAAAACTTACAAGCATGCTCCTGTGGGGGAATGCATTATCTGGACCAATCCCAGCTGAGATTTCAAACTGTTCATCACTTGTTATATTTGATGTCTCTTCTAATGAGCTCTCAGGTGAAATACCTGGGGACTTTGGGAAGCTAGTGGTTCTGGAACAGCTTCATCTATCAGACAATTCACTCACAGGTCAAATACCATGGCAGTTGAGTAACTGCACAAGCCTTGCCACTGTTCAGCTTGACAAGAATCAGTTATCAGGTAAAATTCCATGGCAAGTTGGCAAGTTGAAGTTTCTGCAGAGTTTTTTCATGTGGGGTAATTCAGTGTCTGGAACCATACCATCCTTTTTTGGTAACTGCACTGAACTCTATGCACTTGATCTTTCAAGGAACAACCTCACAGGTTCTATCCCTGAAGAGATTTTCAGTTTGAAGAAGCTGAGTAAGCTTCTTCTTCTTGGAAATTCATTAACTGGAAGGCTGCCACCAAGTGTTGCAAATTGTGAATCTCTAGTGAGGCTGAGGGTTGGAGAAAACCAGCTTTCAGGAGAGATTCCTAAAGAGATAGGCCAACTTCAGAATCTGGTATTTCTTGACTTGTACATGAACAACTTCTCTGGAAGCTTACCAGTGGAGATTGCAAACATCACAGTTCTTGAGCTTTTGGATGTGCATAAGAACAACCTAACTGGGGTGATTCCATCTCAGATAGGTGAACTTCAAAATTTGGAGCAGCTTGATCTCAGTAGAAATACTTTAACAGGTGAAATTCCTTGGAGCTTTGGAAACTTAAGTTATTTGAACAAGCTCATCCTCAACAATAATTCACTAACAGGGTCAGTTCCAAAATCCATTAGAAACTTGCAGAAGCTGACACTATTGGATTTGAGTTACAACAGCCTCTCTGGTGGCATACCTCCAGAGATTGGTTATATTACAAGCTTAACTATCAGTTTGGATTTAAGCTCAAATGCATTCACAGGGGAAATCCCAGACTCAATGTCTGCTTTGACACAGTTACAATCACTGGATCTTTCTAATAATATGCTTCATGGAACAATCAAGCTTCTTGGTTCTCTCACTAGTCTCACTTACCTCAATATCTCCTACAACAACTTTTCAGGCCCTATCCCGGTAACTCCATTCTTCAGAACTTTATCTTCTAATTCATATCTCCAGAACTACCATCTATGCCAGTCCAATGATGGAACTACATGTTCTTCAACTTTTATTCGAAAAAATTGTTTACAATATGCAAAAACCATAGTTCTGATCTTGGTGATTCTAGCCTCGGTTACCATAATTGTCATTGCATCATGGATCGTAGTAACTCGGAGTCATAGATACAAGATTGAAAAAACTTTGGGGACATCAGGTTCCACATCAGAGGATTTCTCTTATCCTTGGACCTTCATTCCATTTCAAAAGCTAAACTTCAGCATAGGTAACATCTTGGATTGCTTGAAGGATGAGAATGTGATTGGAAAGGGTTGTTCTGGCATTGTATATAAGGCTGAGATGCCTAATGGAGAGTTGATAGCGGTGAAAAAGCTTTGGAAAGCAAACAAAGAAGATGAAGCAGTGGATTCTTTTGCTGCAGAAATTCAGATTCTCGGTTATATCCGGCACCGGAACATTGTGAAGCTGCTAGGATATTGTTCTAACACAAGTGTTAAGCTTCTTCTCTATAACTTCATCCCAAATGGTAATCTAAGACAGCTTTTGGAAGGGAATAGAAACTTAGACTGGGAAATTAGATACAAGATTGCTGTTGGAATAGCTCAAGGTCTAGCTTACCTTCATCATGATTGTGTCCCTACAATTATCCACAGAGATGTTAAGTGCAATAACATACTTCTAGATTCCAAGTTTGAGGCATATCTGGCAGATTTTGGTCTTGCAAAGCAAATGATTTCACCAACTTATCATCATGCAATGTCCAGAGTTGCTGGTTCCTATGGTTATATTGCCCCAGAGTATGGGTACTCTATGAACATAACAGAGAAGAGTGATGTATACAGTTATGGAGTGGTATTGTTAGAGATACTAAGTGGGCGTAGTGCTGTAGAATGTAATGTTGGAGATGGGCAACACATAGTTGAATGGGTTAAGAGGAAGATGGGAAGCTTTGAACCAGCAGTGTCAATATTAGATACAAAGCTACAAGGTCTACCAAATCAAATGGTGCAAGAGATGCTTCAAACACTTGGAATTGCAATGTTTTGTGTGAACACTTCCCCTACAGAGAGACCCACCATGAAGGAAGTGATTGCATTGCTAATGGAGGTGAAGACTCAGCCTGAAGAAATGGCCAAAACCTCTCAACCTCTAATAAAACACTCCTCAAATCAAAGATGA 3204 0.4042 MENSVVTTVLLLLFCLTVTKIEVTCLSPDGQALLSLKSSPSVLSSWNPSTSTPCSWNGITCSPQGRVLSLSIPDTFLNISTLPPQLSSLSMLQLLNLSSTNVSGSIPPSFGQLSHLQLLDLSSNSLTGSIPDELGRLSSLQFLFLNSNRLTGTIPQHLANLTSLQVLCLQDNLLNSSIPSQLGSLISLQQFRIGGNPYLTGQIPSQLGLLSNLTTFGAAATGLSGSIPSTFGNLINLQTLALYDTEISGSIPPELGLCSELRNLYLHMNKLTGSIPPELSKLQKLTSMLLWGNALSGPIPAEISNCSSLVIFDVSSNELSGEIPGDFGKLVVLEQLHLSDNSLTGQIPWQLSNCTSLATVQLDKNQLSGKIPWQVGKLKFLQSFFMWGNSVSGTIPSFFGNCTELYALDLSRNNLTGSIPEEIFSLKKLSKLLLLGNSLTGRLPPSVANCESLVRLRVGENQLSGEIPKEIGQLQNLVFLDLYMNNFSGSLPVEIANITVLELLDVHKNNLTGVIPSQIGELQNLEQLDLSRNTLTGEIPWSFGNLSYLNKLILNNNSLTGSVPKSIRNLQKLTLLDLSYNSLSGGIPPEIGYITSLTISLDLSSNAFTGEIPDSMSALTQLQSLDLSNNMLHGTIKLLGSLTSLTYLNISYNNFSGPIPVTPFFRTLSSNSYLQNYHLCQSNDGTTCSSTFIRKNCLQYAKTIVLILVILASVTIIVIASWIVVTRSHRYKIEKTLGTSGSTSEDFSYPWTFIPFQKLNFSIGNILDCLKDENVIGKGCSGIVYKAEMPNGELIAVKKLWKANKEDEAVDSFAAEIQILGYIRHRNIVKLLGYCSNTSVKLLLYNFIPNGNLRQLLEGNRNLDWEIRYKIAVGIAQGLAYLHHDCVPTIIHRDVKCNNILLDSKFEAYLADFGLAKQMISPTYHHAMSRVAGSYGYIAPEYGYSMNITEKSDVYSYGVVLLEILSGRSAVECNVGDGQHIVEWVKRKMGSFEPAVSILDTKLQGLPNQMVQEMLQTLGIAMFCVNTSPTERPTMKEVIALLMEVKTQPEEMAKTSQPLIKHSSNQR 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0085 1067 PANTHER - 6 1063 - -
Lal13g0085 1067 Pfam Leucine Rich repeats (2 copies) 620 657 IPR025875 -
Lal13g0085 1067 Gene3D Ribonuclease Inhibitor 376 695 IPR032675 -
Lal13g0085 1067 PANTHER UNNAMED PRODUCT 6 1063 - -
Lal13g0085 1067 SUPERFAMILY Protein kinase-like (PK-like) 748 1043 IPR011009 -
Lal13g0085 1067 Gene3D Ribonuclease Inhibitor 177 273 IPR032675 -
Lal13g0085 1067 Gene3D Ribonuclease Inhibitor 274 375 IPR032675 -
Lal13g0085 1067 PRINTS Leucine-rich repeat signature 116 129 - -
Lal13g0085 1067 PRINTS Leucine-rich repeat signature 619 632 - -
Lal13g0085 1067 Pfam Protein kinase domain 772 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0085 1067 SMART serkin_6 770 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0085 1067 Gene3D Transferase(Phosphotransferase) domain 1 848 1065 - -
Lal13g0085 1067 Pfam Leucine Rich Repeat 524 546 IPR001611 GO:0005515
Lal13g0085 1067 Gene3D Phosphorylase Kinase; domain 1 746 847 - -
Lal13g0085 1067 ProSitePatterns Serine/Threonine protein kinases active-site signature. 890 902 IPR008271 GO:0004672|GO:0006468
Lal13g0085 1067 ProSitePatterns Protein kinases ATP-binding region signature. 776 799 IPR017441 GO:0005524
Lal13g0085 1067 SMART LRR_typ_2 161 185 IPR003591 -
Lal13g0085 1067 SMART LRR_typ_2 234 258 IPR003591 -
Lal13g0085 1067 SMART LRR_typ_2 330 354 IPR003591 -
Lal13g0085 1067 SMART LRR_typ_2 402 426 IPR003591 -
Lal13g0085 1067 SMART LRR_typ_2 619 642 IPR003591 -
Lal13g0085 1067 SMART LRR_typ_2 546 569 IPR003591 -
Lal13g0085 1067 SMART LRR_typ_2 522 545 IPR003591 -
Lal13g0085 1067 SMART LRR_typ_2 570 594 IPR003591 -
Lal13g0085 1067 SMART LRR_typ_2 113 137 IPR003591 -
Lal13g0085 1067 SMART LRR_typ_2 282 306 IPR003591 -
Lal13g0085 1067 SUPERFAMILY L domain-like 360 684 - -
Lal13g0085 1067 Pfam Leucine rich repeat 92 150 IPR001611 GO:0005515
Lal13g0085 1067 Pfam Leucine rich repeat 381 439 IPR001611 GO:0005515
Lal13g0085 1067 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Lal13g0085 1067 ProSiteProfiles Protein kinase domain profile. 770 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0085 1067 SUPERFAMILY L domain-like 42 389 - -
Lal13g0085 1067 Gene3D Ribonuclease Inhibitor 27 176 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0085 Lal-Chr13 556503 566849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0085 23 1061 Receptor kinase-like Gene Family AT5G56040 44.340 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal13g0085 Pkinase 7.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0085 - - ccaj:109812175 1811.58