Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0060 ATGGCAGAGCAGCCACCACCACCACCACTACCGCCGCATAAAACATACAAACTAACAGCTACTTCTATCTCCTACACTAAATCAACCTCCACTAACACTAACATTATTAATAATATTGCACCACTGTTCCTCTTCAAACATTGCACATCAACTCCACCTTCCTACATTCTCAAAGATGTTTCCCTCACTGCTTACCCTTCTCAAATCCTTGCCATTGTTGGTCCAAGTGGTGCTGGAAAATCTACCCTTCTTGACATTCTATCTGCTAGGACATTGCCCTCAACTGGGACACTTTCCCTTAACTCTTCCCCTTTGAACCCCTCTACATTCAGAAAACTCTCAGCATATGTCCCTCAACACGATGCATGCCTCCCTTTGCTCACTGTTTCTGAGACGTTCGCTTTTTCTGCATGCCTTCTCAAGCCTTATAAGACATGTGATATTTCTATCATTGTTTCCTCTCTTCTCACTGAACTTAGACTAACCCATTTGGCTAACACAAGACTCGGTCATGGCCTATCAGGTGGAGAACAAAGAAGGGTTTCAATAGGACTTAGTCTCCTTCATGATCCAGCAGTGTTGCTCCTTGATGAACCAACTTCTGGACTTGACAGCACCTCTGCTTTCAAAGTCATGCAGATTCTGAAGTCAACTTGTGTTTCTCGTCACAGGACAATTATTCTTTCCATTCACCAACCAAGCTTCAAGATCCTCTCTTGCATTGACAGGATCTTGCTGTTATCAAAAGGGACTGTGGTTCATCATGGAAGCCTTGCTTCACTTCAATCATTCTTGCACTCAAATGGCTTCATTGTACCTCATCAACTCAATGCCTTGGAATATGCCATGGAAATGTTAAACCAACTAAATGAGCTTAAACCAATTACTCCACCAAGCATTCCTGATTCTCCAGAAAGTTCTACATCAGCTTCTCTATCTGATCATAATAGTGGAACTACGACTATTATTACTACTAATACTATGAAAGAGATCCGGTACAAGAGTTCTAGAATCCATGAAATTTGCACTCTTTATAGGAGGTTTTGGAAGATAATTTTCAGAACTAGGCAACTCCTTTTGACTAACACATTAGAGGCACTTCTAGTGGGTGTTGTTTTAGGAACAATTTACATCAACATTGGTTATGATAAGGAAGGCATTGAGAAAAGGTTTGGTCTCTTTGCATTCACTCTCACATTCCTCCTGTCTTCCACAACTGAAACACTTCCAATCTTCATTAATGAAAGGCCAATCTTATTAAGAGAAACTTCAAGTGGGGTTTATAGGTTATCATCTCATCTCATTGCAAACACACTTGTTTTCTTGCCATATTTATTAGTAGTTGCTGTTATATACTCTATACCAGTCTACTTTTTAGTTGGTCTATGTGCTTCTTGGTTATCTTTTTCTTATTTTGTCTTGGTCATATGGGTCATAGTTCTTATGGCAAACTCTTTTGTCCTGTTTTTGAGTTCTCTTGCTCCAAACTACATTGCTGGGACTTCACTCTTGACTATGCTTCTTGCAGCATTTTTTCTCTTCTCTGGCTATTTTATCTCGAAGGATAGCTTACCAAAATACTGGCTCTTCATGCATTTCTTGTCTATGTATAAATATGCTCTTGATGCTCTTCTTATCAATGAGTATTCTTGCTTAGTTACAAGGTGTTTCATATGGTACCAAGAAAATAATAAGCTTTGCATGGTTACGGGTGCTGAGGTGTTACAAAATAGAGGGCTCAGCGTGGGAGAAAGATGGACCAACGTGTATTTCTTGATTGGCTTCTTTGTGTTATATCGTGTGCTTTGCTTCTTGGTTTTGCTTAGAAGGGTTTCAAGATCCAAAAGATGA 1851 0.3976 MAEQPPPPPLPPHKTYKLTATSISYTKSTSTNTNIINNIAPLFLFKHCTSTPPSYILKDVSLTAYPSQILAIVGPSGAGKSTLLDILSARTLPSTGTLSLNSSPLNPSTFRKLSAYVPQHDACLPLLTVSETFAFSACLLKPYKTCDISIIVSSLLTELRLTHLANTRLGHGLSGGEQRRVSIGLSLLHDPAVLLLDEPTSGLDSTSAFKVMQILKSTCVSRHRTIILSIHQPSFKILSCIDRILLLSKGTVVHHGSLASLQSFLHSNGFIVPHQLNALEYAMEMLNQLNELKPITPPSIPDSPESSTSASLSDHNSGTTTIITTNTMKEIRYKSSRIHEICTLYRRFWKIIFRTRQLLLTNTLEALLVGVVLGTIYINIGYDKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSHLIANTLVFLPYLLVVAVIYSIPVYFLVGLCASWLSFSYFVLVIWVIVLMANSFVLFLSSLAPNYIAGTSLLTMLLAAFFLFSGYFISKDSLPKYWLFMHFLSMYKYALDALLINEYSCLVTRCFIWYQENNKLCMVTGAEVLQNRGLSVGERWTNVYFLIGFFVLYRVLCFLVLLRRVSRSKR 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0060 616 MobiDBLite consensus disorder prediction 297 319 - -
Lal13g0060 616 Pfam ABC transporter 57 201 IPR003439 GO:0005524
Lal13g0060 616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 265 IPR027417 -
Lal13g0060 616 Pfam ABC-2 type transporter 231 290 IPR043926 GO:0140359
Lal13g0060 616 Gene3D - 38 275 IPR027417 -
Lal13g0060 616 PANTHER ABC TRANSPORTER G FAMILY MEMBER 8 5 610 - -
Lal13g0060 616 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 5 610 - -
Lal13g0060 616 SMART AAA_5 66 251 IPR003593 -
Lal13g0060 616 ProSitePatterns ABC transporters family signature. 173 187 IPR017871 GO:0005524
Lal13g0060 616 MobiDBLite consensus disorder prediction 302 319 - -
Lal13g0060 616 Pfam ABC-2 type transporter 340 549 IPR013525 GO:0016020|GO:0140359
Lal13g0060 616 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 39 274 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0060 Lal-Chr13 371103 373347 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0060 50 317 Calmodulin-binding Proteins AT2G36910 26.812 2.29e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0060 K05681 - qsu:112007275 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0060 13 371103 373347 Lal13g0060 13 371103 373347 ECH