Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0041 ATGAAGAGTGTTGTAGTTATTGTACTACTGTATGTGGTGATGGTGGTGCCATGGCGCGTTTGCTGCCAACAAAAGGGGCTTCATGTGAACATGACACTTATTCAGAATGCTCATGCTACCACTGCTCTGTGTTTGGATGGGAGTTTACCCGCGTATCATTTACACAGAGGATATGGAGCTGGACAGAATAATTGGCTTCTACAATTCGAGGGAGGTGGGTGGTGCAATGACTTGGCTTCATGCTTGGATAGAGCCCAAAGTCGCAGGGGTTCAACACGTTACATGACCAAGTGGGAGGCCTTTAATGGCATTTTGACCAATGATTCTTCCCTTAATCCAGACTTTTACAACTGGAACCGTGTGAAGCTGAGATATTGTGATGGAGCTTCATTCACTGGAGACGCTGTGTTCAATAACAAGACAACAACGCTTTATTTCAAAGGGCAAAAGATTTGGGAAGCTATTATCCAAGACCTTCTACCAAAAGGTTTGGGAAAGGCACACAAGGCTTTGCTTTCAGGTTGTTCTGCTGGAGGTTTAGCAACTTTTCACCATTGTGACAACTTCGCCAAGTATTTGCCAAGTAATGCAAGTGTTAAATGCTTAAGTGATGCAGGTTTTTTTCTTGATGGGAGAGATATAAGTTTGAACCACACTATGCGATACTTCGTCAGAAGTCTTGTTGAATTTCAGTTCCGTCATATATTGGTGCCACCTTCTGCTGATATGCAAGGACATTGGAACCACTGCAAGTTGGACCCAGCGGCATGCACACCAGACCAAATTAATATATTGCAAGGTTTTAGGCACTACATGCTTGCAACTTTGCGTCCATTCTACATATATTCAGGAAGAGGGGGGATGTTCATAAATTCATGCTTTGCTCATTGCCAAAGTGAGTCACAAGATACTTGGTTTGCAGATGATTCTCCAAGAGTAAACAACAAGACTATTGCAGAAGCGGTTGGTGATTGTACCGTGTACCACCCCACCCCACCCATTGAGCTGAAATTACGAAAAACATCTTTCCGTTCCATTCCGTTCGAAGTTATGCATAGCCAGCACACACTTTTACTCACTAGTTTCTCAACAACATTCTTCCCTCTCTCTCATCGTCACCATCACACTTTTACACGAAGGAGATTGACTCAAACTCCCTCTTCTTCTTCCATCAAGTCAATGTCTTTTCCTTCCTCCAACTCTCTCTCTACTAATAATGACGATAACAACAACAACACCAACAACAACAACAACAGTGCTTTTCTGAAACTGAACCACTCCACATTCTTGGCTTCCCTCATGCCCAAGACAGAGATTGGTGTTGACCCTTTTCTCCATTCTCATCCTCACTACGATGGCCGCGGTTCTCTCATCGCTATTTTCGATTCTGGTGTAGACCCGGCTGCTGCTGGATTACAGGTTACCTCTGATGGGAAACCAAAAATTCTTGATATCCTTGATTGCACTGGGAGTGGAGATATTGATACCTCAAAGGTGGTGAAGGCTGATGCTGAGGGTTGTATTTCAGGTGTTTCAGGGGCATCTTTGGTTATCAATACTTCGTGGAAAAATCCTTCTGGTGAATGGCATGTGGGTTATAAACTTGTTTATGAGCTTTTTACAAAAAAATTGGTTTCTCGTCTGAAGAGAGAAAGAAAGAAAAAGTGGGATGAGAAAAACCAGCAGGAAGTTGCTAAGGCTGTAAAACAACTTGATGGTTTTGATCAGGTTGAGGAAGCAAAACTTAAAAAGGCTCGTAAAGATCTCCAGAATAGGCTTGATCTCCTGAGAAAGCAATCTGAGAGCTATAATGATAAAGGGCCTGTCATAGATGCCGTTGTCTGGTATGATGGAGAGGTCTGGAGGGCTGCTCTTGACACACAGAGTCTTGAGGATGATCCAGACAGTGGGAAGCTTGCTAACTTTGTACCCTTAACTAACTATAGGACTGAGAAGAAGTATGGTGTCTTCAGCAAATTAGATGCTTGTTCATTTGTTGCAAACATCTATAATGATGGGAACACCTTAAGTATCGTAACAGATTGCTCCCCCCATGGCACTCATGTTGCTGGTATAGCTGCTGCATTCCACCCAGAGGAACCCTTGTTGAATGGAGTTGCACCAGGAGCACAACTAATATCTTGTAAAATTGGGGACTCTCGCTTAGGTTCAATGGAAACTGGAACGGGTTTGACACGGGCACTGATTGCTGCTGTTGAGCATAAATGTGATCTTATCAACATGAGTTATGGTGAGCCAACATCGCTGCCAGACTATGGGCGCTTTGTTGACCTTGTGAATGAGGCAGTAAACAAGCACCGGCTGATATTCGTGAGCAGTGCTGGTAATAGTGGGCCAGCATTGAGCACCGTTGGTGCACCTGGTGGTACATCTTCCAGTATCATAGGCATTGGTGCTTATGTTTCTCCTGCTATGGCAGCTGGTGCTCATTCTGTTGTTGAACCACCATCTGAGGGGCTTGAATACACTTGGTCTAGCCGAGGACCAACAACTGATGGAGATCTTGGTGTCTGCATAAGTGCTCCTGGTGCCGCTGTTGCTCCTGTTCCTACATGGACGCTTCAACGACGTATGCTCATGAATGGGACATCAATGGCATCGCCATCAGCCACTGGGGGGATTGCATTGCTCATAAGTGCAATGAAGGCTGAGGGAATTCCTATGAGTCCATATAGTGTGAGGAAGGCCCTTGAGAACACATCTGTTCCCATAGGTGGTTCACCCGAGGATAAACTATCCACTGGGCATGGGCTTATGCAAGTTGACAAGTGTTATGAGTATATACAGAAGTCTCAAAATATTACAGGTGTTTGGTATCAAATAAACATAAAGCAATCTGGAAAAGCAACAGATCATTCGTCACGGGGCATTTACCTGAGGGAGGCTAGTACTTCCCGACAATCTACTGAGTGGACAGTGGAAGTTGATCCAAAATTTCATGAAGATGCCAACAAGTTGGAAGAATTGGTTGTGTTTGAGGAGTGCATTGAGTTACATTCAACAGATGAGACAGTTGTGAAAATCCCCGAGTATCTATTGCTCACTCATAATGGTCGTACCTTCAGCATAATTGTGGATCCTACCAATTTATCTGATGGCCGTCTGCATTATTTTGAGGTCTATGGTATTGACTGCAAAGCACCATGGCGTGGCCCTCTTTTCCGAATTCCAATTACCATAACAAAGCCCGTGGCTGTAACTAATAAGCCTCCACGAGTTTCATTTTCAAAGTTGTTATTCCAGCCAGGCCATATAGAAAGGAAATATATACAAGTTCCACATGGTGCATCTTGGGTTGAAGCAACCATGGACACATCAAGTTTTGATACAGCTCGAAGATTTCTTGTGGACACTGTTCAGATATCTCCACTGCAAAGCCCTTTGAAATGGAGGAATGTGATATCTTTATCTTCGCCAACTGTCAAAAGCTTCGCCTTTAGGGTAGTAGGTGGTCAAACACTGGAACTAGTAATAGCTCAGTTTTGGTCAAGTGGCAGAGGGAGTCATGAGACTACCAGTGTGGATCTTGAGCTTGTGTTTCATGGCATAAAAGTCAATCAAGAGGAAGTTGTGCTTGATGGGAGTGAAGCACCAGTTAGAATTGATGCTGAAGCACTACTGGCATCTGAGAAACTTGCACCTGTAGCGACTCTAAGCAAGATAAGGGTCCCATATCGACCAATACATGCTAAGATTAGTGCACTTTCAGCTGATCGTGACAAACTCCCCTCTGGAAAGCAGATACTAGCACTAACATTAACGTATAAGGTCAAATTGGAGGATGAAGCTGAAGTAAAACCACAAATACCATTTCTAAATGACCGGATATATGACACTAAATTTGAGTCTCAATTTTATATGATTTCTGATTCGAATAAGCGCATATATTCAAGTGGAGATGCCTACCCAAACTCTACAAAATTGCCCAGGGGAGAATACAATTTACAGCTATATTTAAGGCATGATAATGTGCAAATTTTGGAGAAGATGAAGCAACTGGTGTTATTCATTGAACAAAATTTGGGAGACAAGGACGTCGTTCGGCTATGTTTTTTCTCTCAACCAGATGGTCCACTGATGGGAAATGGTTCCTTCAAGTCCTCAACTTTAGTTCCAGGTATAAAAGAAGCATTTTATCTTAGTCCACCACTAAAGGACAAGCTTCCTAAGAATTCTCCGGTAGGATCTGTATTGGTGGGCGCAATATCATATGCGGAATTACCATTTTCTGAACATAAAAACCCAGAAAAGCATCCTGTATCATATCGTGTTTCTTATATAGTTCCGCCAAATAAGATTGATGAGGACAAGGGAAAAGGTTCTTCCTTATCTTCCAAGAAGACAGTTTCTGAGCGTTTAGAAGAAGAGGTAAGAGATGCAAAAATAAAAGTGCTTGGTAGCCTAAAACAAGAAAGTGATGAAGAGCATTTGGAATGGAAGAACTTGTCTGCCTCTCTCAAATCTGAATATCCAAAGGACATTCAATTGCTTTCAAAGATTTTGGAAGGTTTAGTTGCTAGGAGTCCTATCAAGGACAAATTCCAGCATCATGAAGAGGTAATTGATGCAGCCAATGAGGTGATTGACAGTATTGATAGGGAAGAGTTAGTAAAACAATTTGCACTAAGAAATGATCCAGATGATGAGGGAGCAGAGAAAATCAAGAAGAAGATGGAATCAACGCGCGACCAGTTAGCAGAGGCACTTTACCAAAAAGGGCTTGCACTGGCAGAAATTGAATCTTTAAAGGAGGTAGATAAGTCTTCAGCTTCATCTGCTGCAACAGAAGGTACAAAACTAGATGCAGTGAAAACCGATGAGCAACCGAAGGATAATCCAGACTTATTTGAAGAGAACTTCAATGAACTGAAGAAATGGGTTGATGTGAAGTGCACAAAATATGGAATCCTCTTGGTCACAAACGAAAGGCGTAGTGGAAGGCTTGGGACAGCATTGAAGGTACTGAGTGACATAATTGAAGATGACAAAGAACCTGCAAAGAAGAAATTTTATGAACTAAAGCTGTCATTGCTTGAGGAAATTGGATGGACTCATTTGGCAACTTATGAGAGACAGTGGTTGCTTCTGCGTTTTCCTCCAACCTTACCCCTTTTCTAG 5139 0.4271 MKSVVVIVLLYVVMVVPWRVCCQQKGLHVNMTLIQNAHATTALCLDGSLPAYHLHRGYGAGQNNWLLQFEGGGWCNDLASCLDRAQSRRGSTRYMTKWEAFNGILTNDSSLNPDFYNWNRVKLRYCDGASFTGDAVFNNKTTTLYFKGQKIWEAIIQDLLPKGLGKAHKALLSGCSAGGLATFHHCDNFAKYLPSNASVKCLSDAGFFLDGRDISLNHTMRYFVRSLVEFQFRHILVPPSADMQGHWNHCKLDPAACTPDQINILQGFRHYMLATLRPFYIYSGRGGMFINSCFAHCQSESQDTWFADDSPRVNNKTIAEAVGDCTVYHPTPPIELKLRKTSFRSIPFEVMHSQHTLLLTSFSTTFFPLSHRHHHTFTRRRLTQTPSSSSIKSMSFPSSNSLSTNNDDNNNNTNNNNNSAFLKLNHSTFLASLMPKTEIGVDPFLHSHPHYDGRGSLIAIFDSGVDPAAAGLQVTSDGKPKILDILDCTGSGDIDTSKVVKADAEGCISGVSGASLVINTSWKNPSGEWHVGYKLVYELFTKKLVSRLKRERKKKWDEKNQQEVAKAVKQLDGFDQVEEAKLKKARKDLQNRLDLLRKQSESYNDKGPVIDAVVWYDGEVWRAALDTQSLEDDPDSGKLANFVPLTNYRTEKKYGVFSKLDACSFVANIYNDGNTLSIVTDCSPHGTHVAGIAAAFHPEEPLLNGVAPGAQLISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEPTSLPDYGRFVDLVNEAVNKHRLIFVSSAGNSGPALSTVGAPGGTSSSIIGIGAYVSPAMAAGAHSVVEPPSEGLEYTWSSRGPTTDGDLGVCISAPGAAVAPVPTWTLQRRMLMNGTSMASPSATGGIALLISAMKAEGIPMSPYSVRKALENTSVPIGGSPEDKLSTGHGLMQVDKCYEYIQKSQNITGVWYQINIKQSGKATDHSSRGIYLREASTSRQSTEWTVEVDPKFHEDANKLEELVVFEECIELHSTDETVVKIPEYLLLTHNGRTFSIIVDPTNLSDGRLHYFEVYGIDCKAPWRGPLFRIPITITKPVAVTNKPPRVSFSKLLFQPGHIERKYIQVPHGASWVEATMDTSSFDTARRFLVDTVQISPLQSPLKWRNVISLSSPTVKSFAFRVVGGQTLELVIAQFWSSGRGSHETTSVDLELVFHGIKVNQEEVVLDGSEAPVRIDAEALLASEKLAPVATLSKIRVPYRPIHAKISALSADRDKLPSGKQILALTLTYKVKLEDEAEVKPQIPFLNDRIYDTKFESQFYMISDSNKRIYSSGDAYPNSTKLPRGEYNLQLYLRHDNVQILEKMKQLVLFIEQNLGDKDVVRLCFFSQPDGPLMGNGSFKSSTLVPGIKEAFYLSPPLKDKLPKNSPVGSVLVGAISYAELPFSEHKNPEKHPVSYRVSYIVPPNKIDEDKGKGSSLSSKKTVSERLEEEVRDAKIKVLGSLKQESDEEHLEWKNLSASLKSEYPKDIQLLSKILEGLVARSPIKDKFQHHEEVIDAANEVIDSIDREELVKQFALRNDPDDEGAEKIKKKMESTRDQLAEALYQKGLALAEIESLKEVDKSSASSAATEGTKLDAVKTDEQPKDNPDLFEENFNELKKWVDVKCTKYGILLVTNERRSGRLGTALKVLSDIIEDDKEPAKKKFYELKLSLLEEIGWTHLATYERQWLLLRFPPTLPLF 1712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0041 1712 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 433 911 IPR034051 GO:0006508|GO:0008240
Lal13g0041 1712 ProSitePatterns Serine proteases, subtilase family, histidine active site. 685 695 IPR022398 -
Lal13g0041 1712 ProSitePatterns Serine proteases, subtilase family, serine active site. 869 879 IPR023828 -
Lal13g0041 1712 ProSiteProfiles Serine proteases, subtilase domain profile. 438 932 - -
Lal13g0041 1712 Coils Coil 579 606 - -
Lal13g0041 1712 Pfam Tripeptidyl peptidase II 1214 1398 IPR022229 -
Lal13g0041 1712 Gene3D - 946 1081 - -
Lal13g0041 1712 Pfam Subtilase family 453 924 IPR000209 GO:0006508|GO:0008236
Lal13g0041 1712 Gene3D - 1454 1712 - -
Lal13g0041 1712 MobiDBLite consensus disorder prediction 1594 1620 - -
Lal13g0041 1712 MobiDBLite consensus disorder prediction 377 418 - -
Lal13g0041 1712 Coils Coil 1558 1578 - -
Lal13g0041 1712 Pfam Pectinacetylesterase 22 231 IPR004963 GO:0016787
Lal13g0041 1712 MobiDBLite consensus disorder prediction 381 418 - -
Lal13g0041 1712 PANTHER TRIPEPTIDYL PEPTIDASE II 406 1605 - -
Lal13g0041 1712 PANTHER PEPTIDASE S8 406 1605 - -
Lal13g0041 1712 SUPERFAMILY Subtilisin-like 439 942 IPR036852 GO:0004252|GO:0006508
Lal13g0041 1712 Coils Coil 1450 1470 - -
Lal13g0041 1712 PRINTS Subtilisin serine protease family (S8) signature 453 472 IPR015500 -
Lal13g0041 1712 PRINTS Subtilisin serine protease family (S8) signature 681 694 IPR015500 -
Lal13g0041 1712 PRINTS Subtilisin serine protease family (S8) signature 868 884 IPR015500 -
Lal13g0041 1712 Gene3D Peptidase S8/S53 domain 608 943 IPR036852 GO:0004252|GO:0006508
Lal13g0041 1712 Gene3D - 497 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0041 Lal-Chr13 271258 294796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0041 3 324 Carbohydrate Esterase AT5G23870 55.978 3.07e-137 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0041 K01280 - gmx:100787184 2170.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0041 13 271258 294796 Lal13g0041 13 271258 294796 ECH
Lal9g0813 9 5866463 5884996 Lal13g0041 13 271258 294796 PCT
Lal13g0041 13 271258 294796 Lal9g0813 9 5866463 5884996 PCT