Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0027 ATGGAACAATACCGTAATTATACCAATCATGCTACATCTAATATGTTTGGAGAGGAACATGTCCAGTTAACAAATCAACTGAAGTTTGATTCCGCAAGCTTGGCAGAGAAGATTGAGCTTCTTGATCTTTCTAAAAGGAAGATGCTGGGACACAGTTTGAGTTGTTGCTCATATGATGAACTCCAAGGAATTGAGAATCAGTTGCATACAAGTTTGGAAAGCATCAGGTTGAAAAAGGCTGAACTATACAAGGAGCACATTGAAAAACTACATAGCCAGGAAAGAGACTTGCTTAAGGAGAATGCGGAATTAAATGCATCGTGCGTGGAAAAATCATCACAGAAGCAATGGGCAAGACAGACAGAAGCAGAAGAAACAGCACCCCGCAGTCCTAGAACCAACACTTTGGGTGTGGAGACACAATTATTTATTGGACTGCCATACCATCCTAGCTAG 456 0.4101 MEQYRNYTNHATSNMFGEEHVQLTNQLKFDSASLAEKIELLDLSKRKMLGHSLSCCSYDELQGIENQLHTSLESIRLKKAELYKEHIEKLHSQERDLLKENAELNASCVEKSSQKQWARQTEAEETAPRSPRTNTLGVETQLFIGLPYHPS 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0027 151 ProSiteProfiles K-box domain profile. 24 118 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lal13g0027 151 PANTHER MADS-BOX TRANSCRIPTION FACTOR 56 23 147 - -
Lal13g0027 151 Coils Coil 83 107 - -
Lal13g0027 151 Pfam K-box region 25 107 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lal13g0027 151 MobiDBLite consensus disorder prediction 115 136 - -
Lal13g0027 151 PANTHER MADS BOX PROTEIN 23 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0027 Lal-Chr13 168791 173246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0027 24 147 MADS-box Gene Family AT4G22950 38.931 2.66e-20 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0027 - - gmx:100800580 150.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0027 13 168791 173246 Lal13g0027 13 168791 173246 ECH