Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0026 ATGGGTAAGGACTCTTGGTATTGGAGTGTAAGCAGGTCCTCCAAGTCTAAGGGAGGTAGAACAGTTGAAACTCCAGAAATCCCTTCTGGTTGCATGTGTTCACTCTTTCAATCCTTTCATTTCCATCCATTTCACTTTTCCATAAACAACCAACAACAACCCTCTTCCAACACTTCCTCTCATAATATCCCACAACACCTGCTAACTGTCCTCAAAGGAGGTGAAGCACCTAGGAATAGTTTGGAATCAGAAGATGAAAATTTAAAAATTCCAGTAACGAGTCATGATGAATATAATGATGATCTTGATCACCACTTAACTATTCTTTTGATTTTGAAAATCTTGAAGAATATAAGAGTCAAAACAAGTGGAGCTAGCACAAGAGCAAGAGGAGGAAATTTGAGTGATATCTCTTCAGAAATCATAAGCTCTCCAGGGACTAAGACACCAACTCTGGTAGCCAGATTAATGGGTCTTGATCTTCTTCCAGATGCAGTACACTCATCATCATCATCATCTCCCTCTTCATCTATTTCCACTCCAAACCAACAAGGCCATAATCCTAATCATATGCACCATCACCTTAAACAAAGGCAACACATTCAATTAATGAAGCATAGAAACAGCACAGGAAGTTACAACAATGCATGCACTAATCACTCCTTGCATGACACTCCTAGAAGTTCAGATGTTGAACATAGAAGACTATCTCTCCAAATTAACAAAGAAAACATGGATTTGGATCTACCTCAGTTTTCATTTTCAAAAAGGAAATGCAATGATGAGAATTACAATTATAGCAGCAGAAGTCCAAGCAACTATGCTAGGCAAATTGTGAAACAGGTTAAAGAAAGTGTAAGCAGGAAAGTCGGGCTTGACATCACCAACTCTGTCAAAAGCAGAGAGCAAGAAAGAGAAGAGTTTGTTAACCAATTGAGGCTCAAGAAATCTCTCAAAAAATCAGTGAAGTCAATAGATGAATCAATCCCAGGAAAATACTCAAGCCAAACTCAGTCACCGAGACACAGCAGATTCATAGACACTAAAAACAAACCAAGCACAAAACCATCATCACCACTTACCCCAAAGGATCAAAACACAATTCCAAAACCGCAACCACCTTCACCAGTGGTCAACAATGAGGCACCCGTTTCAAGAGTTTTGACTAAGGCAATAAAGCCTCAAACATTGCCTGAGCAAGAGTTGGAGAAACAAAATCCAGCCCCAGAATACAAGAAAATCAGCAAAGAGAAGTTCAGTTCGAGGATAAACAAGCCTCAACAAACATCACCAACCCGAAAAAAACAGGAAGAAACATTTGTTATTCGTCCTCCACTATCATCAAGTAGAGCCAACGACATGAAAAACAAAAGCAAGAGAACTCATCCACTGCCGAGCAATGTTCTCAATAACCTTAACACTACGGTCCCTAATCTTCTCCCTGTGAAGATGAAGACAGACCCTTCTCCTCCAGCAACTAATATTCCTCAAAAACAGGTAGCAGAGAGGCGAGTACCGAAAGGGAGGACAGAATTATGTAGTTGTTGGAGTGAGAAGTACAAGCAAGAAGCGCATACACCCTCTGTCCGCGGCAGAGTAACCAACGATGAAAACAAACCTAACGGTGTCTCAACCATCACTGAAGAAGGACAAGAATTTCATTACATCTCAACCATTCTAACTCGTACTACTATTGCCCCACACAAACACTTAAATTTTCAATGGTTCTCTCTTTCCCATCCATTGGACCCTTCAATTTTTGACCAACTTGAGCTTTACCCATCATACAATTCCATATTTTCTTATCCCGGAAACTATAAAGATAGCACCTTTAAGCAGAATAGGCAACTAGGTCAACGTTGTAACCGGCGGTTACTGTTTGATTTGGTGGATGAATTGTTGTCAGAGATTGTGGTTAAACCAAAGTGGTGTAATTACGATGATGGGATGTTGTTGTTGGAGAGAGTATGGAAGAAGGTTGGGAGTTTCCCACGTGCGAAATGTGAGGTTCTTGGAGACATTGATAGATTGGTAGATATGAATGAAGGAGAAGGAGAAAGAGAAAGAGAAGAAGGGTTGATGGCAGAGATTGAAGGGAACATATTGGAGACGTTGGTGCATGAAACGGTTACCGTTATGGTTGGTGTCGTTTAG 2154 0.4053 MGKDSWYWSVSRSSKSKGGRTVETPEIPSGCMCSLFQSFHFHPFHFSINNQQQPSSNTSSHNIPQHLLTVLKGGEAPRNSLESEDENLKIPVTSHDEYNDDLDHHLTILLILKILKNIRVKTSGASTRARGGNLSDISSEIISSPGTKTPTLVARLMGLDLLPDAVHSSSSSSPSSSISTPNQQGHNPNHMHHHLKQRQHIQLMKHRNSTGSYNNACTNHSLHDTPRSSDVEHRRLSLQINKENMDLDLPQFSFSKRKCNDENYNYSSRSPSNYARQIVKQVKESVSRKVGLDITNSVKSREQEREEFVNQLRLKKSLKKSVKSIDESIPGKYSSQTQSPRHSRFIDTKNKPSTKPSSPLTPKDQNTIPKPQPPSPVVNNEAPVSRVLTKAIKPQTLPEQELEKQNPAPEYKKISKEKFSSRINKPQQTSPTRKKQEETFVIRPPLSSSRANDMKNKSKRTHPLPSNVLNNLNTTVPNLLPVKMKTDPSPPATNIPQKQVAERRVPKGRTELCSCWSEKYKQEAHTPSVRGRVTNDENKPNGVSTITEEGQEFHYISTILTRTTIAPHKHLNFQWFSLSHPLDPSIFDQLELYPSYNSIFSYPGNYKDSTFKQNRQLGQRCNRRLLFDLVDELLSEIVVKPKWCNYDDGMLLLERVWKKVGSFPRAKCEVLGDIDRLVDMNEGEGEREREEGLMAEIEGNILETLVHETVTVMVGVV 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0026 717 Pfam DUF761-associated sequence motif 139 167 IPR032795 -
Lal13g0026 717 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 717 - -
Lal13g0026 717 PANTHER DUF4378 DOMAIN PROTEIN 1 717 - -
Lal13g0026 717 MobiDBLite consensus disorder prediction 165 199 - -
Lal13g0026 717 MobiDBLite consensus disorder prediction 421 435 - -
Lal13g0026 717 MobiDBLite consensus disorder prediction 319 473 - -
Lal13g0026 717 MobiDBLite consensus disorder prediction 165 188 - -
Lal13g0026 717 MobiDBLite consensus disorder prediction 405 420 - -
Lal13g0026 717 Pfam Domain of unknown function (DUF4378) 552 708 IPR025486 -
Lal13g0026 717 MobiDBLite consensus disorder prediction 1 23 - -
Lal13g0026 717 MobiDBLite consensus disorder prediction 328 343 - -
Lal13g0026 717 MobiDBLite consensus disorder prediction 350 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0026 Lal-Chr13 158285 161093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0026 117 711 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 33.537 5.87e-45 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0026 - - lang:109335605 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0026 13 158285 161093 Lal13g0026 13 158285 161093 ECH
Lal13g0026 13 158285 161093 Lal24g0029 24 199475 202794 LSH
Lal2g0888 2 5817700 5821580 Lal13g0026 13 158285 161093 PCT
Lal9g0780 9 5549363 5550694 Lal13g0026 13 158285 161093 PCT
Lal13g0026 13 158285 161093 Lal2g0888 2 5817700 5821580 PCT
Lal13g0026 13 158285 161093 Lal9g0780 9 5549363 5550694 PCT