Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0022 ATGCCATCTCGTATACTAGCCACGTCAGCATCTCCACCACATCATCAGTTTCTAATTCCTTTCCTCGCTTCCTCCGCCTCCCTCCTCCTCCTCCTCTTCCTCTGCCTCCGCTTCTTCACTCTCCGTCTCAAACGCACCACCCCTTCCTCCGACCCACCCCATCACTACTCCTTCCATTTCCTCCGCCGTGCCACCAAATCCTTCTCCACTCGCCTCGGCCATGGCGGCTTCGGCCCCGTGTTCTCCGGCATCCTCCCTCCATCCTCCACACCCGTCGCCGTGAAGTTCATGGACTCCACTTCCTTACAAGGAGAACGCGAGTTTTTCAACGAACTCTTTTTCGCTCCCATGCTTCGTTCTTCTTACGTAGTCCCCCCTATTGGTTTTTGTTGTGACCCTCAACGCCGTCGTTTTCTTCTTGTATATGACCTCATGGATAATGGTAACCTCCACGATGCTCTTCTTCGTCGCAACTCTCCTGAGTTGATTCATTGGAATAAGCGCTTTCTTGTTATTTTTGACATTGCTAAAGGGATTCAGTACCTTCACTCTTTCGAAACGCCTATTATTCATGGTGATATCAAACCCACTAATATTCTTCTCGATCGTTGTTTCTCTGCCAAGATTGCTGATTTCGGACTTGCTCAATTTAAAACCGATCAAGTTGTTATTTCGTGTGTTGAGAGTGAGGATAAGAAAAATCAAGAGTTGGAGAGTGAAGTTGAGGAAACTGAGACATCGCCAGAGATGAACAAGGATGACAAAGTTACAGTTTCATCTTCAACTCCACTCGTGAAGGATTATGTGATGGATTGGATTGGAAAAGAGGTGGAGAAGGATGAATTGGTAATCGGAACTGACTCTAACACTGGATCAAGGATTGGGAAGATTGGAAAAAACAAGAGCAAGAACAAATTGGAATGGTGGGAATCAATGGATGATGAAAAGGAAGTTCTGAAGAAAGTGAAGAGAAAGCCGGTTAGGGAATGGTGGAAGGAGGAGTATTCTCAAGGCCTTGCTAAGGAGAAAAAGAAGAACAAGAAGAAACAACAACAATACACAAATGGCGGAAACAGTGATGATGATTTGTGGGTTAGAGATCATGCTTTGTATAGTGATGTAAATGTAAACAAGAGTAAAACAAAACACAGTAGAAGGAACAGTGGTAGTAGTGTAGATTCTTGGTTTGGTGGGATAAGTGGGGAGCTAAGAAGAGCTCGCAGGAATAGCCATGAATCTGCAGCTAGTGGAGAAATTCCAAAGAGTGGTGTTAGCACTACTCCAAGTATGAGGGGGACTATGTTTTATGTTGCTCCTGAGCATGGCTATAACGGAGATGTATTATCCGAGAAATGTGATGTCTATAGTTTTGGTGTTCTATTGCTTGTTATCATTTCAGGAAGGCGTCCACTTCAGGTGATGACCGGTTCCCCAATATCAGAGTTTCAGCGAGCCAATCTCGTGTCTTGGGCACGCCTTTGTGCACGCAAGGGGAAGCTCATTGAATTGGTTGATCAGTCAATTCAGTCGTTGGATAAAGAACAGGCTATTTTATGCATCAAACTTGCCTTGCTATGTTTGCAAAAGTCACCTGTTTGTCGCCCTTCAATGAATGAGGTTGTGGGAGTGCTTAGTGGGGAATTGGAACCACCTCAATTGCCAGCGGCACACTCTTCTTCACCATCCCACTTCCCGTTCAAGTCTAAAAAAGAAAAAAGCCGGAATGTCAACAACGACAACAACAGTAGCAGGGACTATCCATGGGAAATTTACACCTTGAAGGAGTTGCTTCGCGCTACAAATAGCTTTCATCAAGATAACAAGATTGGAGAGGGTGGATTTGGAAGTGTTTATTGGGGCCGAACAATGAAGCGGTTGAAGGCAATGAGTGCAAAGGCAGAGATGGAGTTTGCAGTTGAAGTGGAAGTACTTGGAAGGGTTAGACATAATAATTTGTTGGGATTGAGAGGGTTCTATGCTGGAGGAGAAGAAAGGTTGATTGTGTATGATTACATGCCTAATCACAGCTTGCTCACCCATTTGCATGGTCATCTTGCTTCTCATTATCTCTTAGATTGGCCTACAAGAATCAGAATAGCAATTGGATCAGCTGAAGGTTTGGCGTATTTGCACCATGAAGCAAATCCTCACATAATTCATAGAGACATAAAGGCAAGCAATGTTCTACTAGACAATGAATTTGAAGCTAAGGTTGCTGATTTTGGTTTTGCAAAGCTGATACCAGAGGGTGTAACCCATGTGACTACAAGGGTTAAAGGCACCCTTGGATACTTGGCACCAGAATATGCCATGTGGGGCAAAGTTTCTGAAAGCTGTGATGTTTACAGCTTTGGGATTTTACTGATAGAGATTATTAGTGCCAAGAAACCGATTGAAAAACTCCCTGGTGGAGTGAAAAGGGATATTGTTCAGTGGGTGACACCTTATGTACAGAAGGGTGTGTTCAATCATATTGCAGATGCAAAGTTGAAAGGGAATTTTGATATAGAGCAATTGAAATCTGTGATCACTATAGCTATGAGGTGCACTGATATTAGCCCCGATAACAGGCCTAACATGGAACAAGTGGTCAAGTGGCTTAAGGGTGGTAATCTAGTCAACAGAATAAAACAAATTCCAAATAATGATGAAGAGATTGAAACAAAACAATCAAATTTGAAAGTACTAAGTGAGAATGATAGGCATGTAATAAGATGA 2718 0.4338 MPSRILATSASPPHHQFLIPFLASSASLLLLLFLCLRFFTLRLKRTTPSSDPPHHYSFHFLRRATKSFSTRLGHGGFGPVFSGILPPSSTPVAVKFMDSTSLQGEREFFNELFFAPMLRSSYVVPPIGFCCDPQRRRFLLVYDLMDNGNLHDALLRRNSPELIHWNKRFLVIFDIAKGIQYLHSFETPIIHGDIKPTNILLDRCFSAKIADFGLAQFKTDQVVISCVESEDKKNQELESEVEETETSPEMNKDDKVTVSSSTPLVKDYVMDWIGKEVEKDELVIGTDSNTGSRIGKIGKNKSKNKLEWWESMDDEKEVLKKVKRKPVREWWKEEYSQGLAKEKKKNKKKQQQYTNGGNSDDDLWVRDHALYSDVNVNKSKTKHSRRNSGSSVDSWFGGISGELRRARRNSHESAASGEIPKSGVSTTPSMRGTMFYVAPEHGYNGDVLSEKCDVYSFGVLLLVIISGRRPLQVMTGSPISEFQRANLVSWARLCARKGKLIELVDQSIQSLDKEQAILCIKLALLCLQKSPVCRPSMNEVVGVLSGELEPPQLPAAHSSSPSHFPFKSKKEKSRNVNNDNNSSRDYPWEIYTLKELLRATNSFHQDNKIGEGGFGSVYWGRTMKRLKAMSAKAEMEFAVEVEVLGRVRHNNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHGHLASHYLLDWPTRIRIAIGSAEGLAYLHHEANPHIIHRDIKASNVLLDNEFEAKVADFGFAKLIPEGVTHVTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLIEIISAKKPIEKLPGGVKRDIVQWVTPYVQKGVFNHIADAKLKGNFDIEQLKSVITIAMRCTDISPDNRPNMEQVVKWLKGGNLVNRIKQIPNNDEEIETKQSNLKVLSENDRHVIR 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0022 905 Gene3D Transferase(Phosphotransferase) domain 1 672 885 - -
Lal13g0022 905 MobiDBLite consensus disorder prediction 564 578 - -
Lal13g0022 905 Gene3D Transferase(Phosphotransferase) domain 1 400 552 - -
Lal13g0022 905 Pfam Protein tyrosine and serine/threonine kinase 68 221 IPR001245 GO:0004672|GO:0006468
Lal13g0022 905 Gene3D Phosphorylase Kinase; domain 1 565 671 - -
Lal13g0022 905 Coils Coil 332 352 - -
Lal13g0022 905 SUPERFAMILY Protein kinase-like (PK-like) 585 875 IPR011009 -
Lal13g0022 905 Coils Coil 227 247 - -
Lal13g0022 905 Pfam Protein kinase domain 603 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0022 905 SUPERFAMILY Protein kinase-like (PK-like) 50 567 IPR011009 -
Lal13g0022 905 Gene3D Transferase(Phosphotransferase) domain 1 57 257 - -
Lal13g0022 905 SMART serkin_6 66 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0022 905 SMART serkin_6 603 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0022 905 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 14 247 - -
Lal13g0022 905 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 252 571 - -
Lal13g0022 905 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 582 751 - -
Lal13g0022 905 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 754 870 - -
Lal13g0022 905 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Lal13g0022 905 MobiDBLite consensus disorder prediction 552 581 - -
Lal13g0022 905 ProSitePatterns Serine/Threonine protein kinases active-site signature. 718 730 IPR008271 GO:0004672|GO:0006468
Lal13g0022 905 ProSiteProfiles Protein kinase domain profile. 66 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0022 905 MobiDBLite consensus disorder prediction 234 257 - -
Lal13g0022 905 MobiDBLite consensus disorder prediction 234 252 - -
Lal13g0022 905 PANTHER OS07G0586332 PROTEIN 754 870 IPR044576 -
Lal13g0022 905 PANTHER OS07G0586332 PROTEIN 582 751 IPR044576 -
Lal13g0022 905 PANTHER OS07G0586332 PROTEIN 252 571 IPR044576 -
Lal13g0022 905 PANTHER OS07G0586332 PROTEIN 14 247 IPR044576 -
Lal13g0022 905 ProSiteProfiles Protein kinase domain profile. 603 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0022 905 MobiDBLite consensus disorder prediction 338 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0022 Lal-Chr13 137183 142995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0022 591 867 Trihelix Transcription Factor Family AT1G70460 44.792 3.43e-74 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lal13g0022 Pkinase 2.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0022 - - lang:109335602 1487.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0022 13 137183 142995 Lal13g0022 13 137183 142995 ECH