Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0021 ATGTCCAAGATTCCAATCACTCCAATAGAAAAGATGTCTTACATTTTAACAAGCTTTCTTCTCTTGACTAGTATAACCTTATGTGCAAATGCTCAACTTATCAAGAAAACTTACATCATTCAAATGGACAAGTCAGCAATGCCAAACACCTTCTCCAATCACCTTGATTGGTACTCATCAAAAGTTCAATCAGTAGTTTCCAACTCAGTAGAAGCTGAGATGGACTATGAAGAGAGAATAATCTATACTTACCAAACTGCTTTTCATGGACTAGCTGCCAAGTTAAGCCAAGAAGAAACTGAGAAGCTAGAAGCAGAAGATGGTGTTTTAGCCATATTCCCTGATACAAAGTATGAGTTACACACCACAAGAAGTCCAACTTTCCTTGGTCTTGAACCTCTGCATCGTAGCACTAATAACATCGGGTCAAACAAGCTAGTAGACCATGATGTTATAGTTGGAGTGTTAGACACTGGGATTTGGCCAGAGAGTGAAAGCTTCAATGACACAGGTTTGAGAGCAGTACCTTCTCACTGGAAAGGTGCATGTGAGACTGGTAGAGGCTTCACAAAAAGCCACTGCAATAAGAAGATTGTCGGGGCAAGAATATTCTACCATGGATATGAAGCAGCAGCAGGTAAATTTGATGAGCAAACAGAATACAAATCACCAAGAGATCAAGATGGGCATGGCACTCACACCGCAGCCACTGTTGCTGGATCTCCGGTGCATGGTGCTAACCTTCAAGGCTATGCTTATGGCACAGCAAGAGGAATGGCACCAGGTGCAAGAATTGCAGCTTATAAAGTGTGCTGGAGTGGTGGATGCTTCAGCTCAGATATTCTATCAGCAGTTGATAAAGCTGTAGCTGATGGAGTGAATGTTCTATCCATCTCTTTAGGTGGTGGAGTCTCCTCATACTACCACGACAGTTTATCTGTGGCTGCATTTGGAGCAATGGAAAGAGGTGTTTTTGTTTCATGCTCAGCTGGAAATGCAGGACCTGAGCCCGTGACCCTCACAAATGTGTCACCTTGGATCACCACAGTTGGAGCCAGCACAATGGATAGGGATTTCCCTGCATATGTTAAGCTTGGGAATGGTGCAAATGTTACTGGAGTCTCACTCTATAAAGGGAGAAACAAGTTATCAGCTAAGAAACAATATCCTTTGATATACATGGGAAGTAATTCCACCAGTCCTGATCCAAGATCTTTGTGCTTGGAAGGAACTTTAGATCCAAAAAGAGTTTCTGGAAAGATTGTGATTTGTGATAGAGGGATTAGTCCAAGGGTGCAGAAGGGGCAGGTGGTGAAAAATGCTGGGGGATTAGGAATGGTTCTTACAAACACTGCAGCTAATGGAGAAGAACTTGTTGCTGATTGTCACCTCATTCCAGCAGTTGCTATAGGAGAGAAAAAAGGTAAAGAACTTAAAGATTATGTTTTGACAAGTAGAAAAGCTACTGCAAATCTAGCATTTTTGAACACAAGGTTGGGAATTAGACCATCTCCTGTAGTAGCAGCATTTTCATCGAGAGGGCCTAATTTTCTCACCCTTGAGATTTTGAAGCCTGATGTTGTGGCTCCCGGTGTGAACATTCTTGCTGCTTGGAGTGGAGCCATTGGTCCGTCAAGTTTAACAACAGATCATAGGAGAGTTAAGTTCAATATACTCTCTGGAACTTCAATGTCATGTCCACATGTAAGTGGCATTGCAGCATTGCTCAAGTCTAAGCATCCAGAATGGAGTCCAGCTGCTATAAAATCTGCTTTGATGACAACAGCTTATGTTCATGACAACACCATCAAGCCTCTTAGAGATGCTTCAACTGCTGAATCTTCAACTCCTTATGATCATGGTGCTGGACACATCAACCCTTCAAGAGCTCTTGATCCAGGTTTAGTATATGACATTGAGCCAAAGGATTACTTTGAGTTCCTGTGTACACAGAAGCTAACTCAAACACAATTAGCAGTTTTTGGAAAATATTCAAACAGGTCTTGTACACACTCTCTTGCTAGTCCTGGTGACTTGAACTACCCTGCCATATCAGTAGTGTTTCCAGAGCAAAAATCCATTTCAGTTTTAACAAGTCACAGAACTGCCACCAATGTTGGCCCTCCTGTTTCTAAATACCATGTTGTTGTTTCACCATTCAAAGGTGCTTCTCTCAAAGTTGTACCAGACACCTTGAATTTCACTAGAAAATACCAGAAACTGTCTTACAAGATTATCTTCATTGCAAAATCTAGGCCAGCAGAACCTGAATTTGGAGGCATGGTATGGAAGGATGGTGTGCACAAGGTTAGAAGCCCAATAGTGATAACATACATGGCTCCAATATGA 2349 0.4198 MSKIPITPIEKMSYILTSFLLLTSITLCANAQLIKKTYIIQMDKSAMPNTFSNHLDWYSSKVQSVVSNSVEAEMDYEERIIYTYQTAFHGLAAKLSQEETEKLEAEDGVLAIFPDTKYELHTTRSPTFLGLEPLHRSTNNIGSNKLVDHDVIVGVLDTGIWPESESFNDTGLRAVPSHWKGACETGRGFTKSHCNKKIVGARIFYHGYEAAAGKFDEQTEYKSPRDQDGHGTHTAATVAGSPVHGANLQGYAYGTARGMAPGARIAAYKVCWSGGCFSSDILSAVDKAVADGVNVLSISLGGGVSSYYHDSLSVAAFGAMERGVFVSCSAGNAGPEPVTLTNVSPWITTVGASTMDRDFPAYVKLGNGANVTGVSLYKGRNKLSAKKQYPLIYMGSNSTSPDPRSLCLEGTLDPKRVSGKIVICDRGISPRVQKGQVVKNAGGLGMVLTNTAANGEELVADCHLIPAVAIGEKKGKELKDYVLTSRKATANLAFLNTRLGIRPSPVVAAFSSRGPNFLTLEILKPDVVAPGVNILAAWSGAIGPSSLTTDHRRVKFNILSGTSMSCPHVSGIAALLKSKHPEWSPAAIKSALMTTAYVHDNTIKPLRDASTAESSTPYDHGAGHINPSRALDPGLVYDIEPKDYFEFLCTQKLTQTQLAVFGKYSNRSCTHSLASPGDLNYPAISVVFPEQKSISVLTSHRTATNVGPPVSKYHVVVSPFKGASLKVVPDTLNFTRKYQKLSYKIIFIAKSRPAEPEFGGMVWKDGVHKVRSPIVITYMAPI 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0021 782 ProSiteProfiles Serine proteases, subtilase domain profile. 117 631 - -
Lal13g0021 782 Pfam PA domain 389 478 IPR003137 -
Lal13g0021 782 Gene3D - 356 499 - -
Lal13g0021 782 Gene3D Peptidase S8/S53 domain 150 644 IPR036852 GO:0004252|GO:0006508
Lal13g0021 782 SUPERFAMILY Subtilisin-like 120 635 IPR036852 GO:0004252|GO:0006508
Lal13g0021 782 PANTHER XYLEM SERINE PROTEINASE 1 27 777 - -
Lal13g0021 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 121 IPR037045 -
Lal13g0021 782 Pfam Subtilase family 149 601 IPR000209 GO:0006508|GO:0008236
Lal13g0021 782 Pfam Fibronectin type-III domain 678 776 IPR041469 -
Lal13g0021 782 Gene3D - 648 779 - -
Lal13g0021 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 777 IPR045051 -
Lal13g0021 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Lal13g0021 782 CDD PA_subtilisin_like 362 490 - -
Lal13g0021 782 Pfam Peptidase inhibitor I9 37 121 IPR010259 -
Lal13g0021 782 CDD Peptidases_S8_3 118 597 IPR034197 -
Lal13g0021 782 PRINTS Subtilisin serine protease family (S8) signature 148 167 IPR015500 -
Lal13g0021 782 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Lal13g0021 782 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0021 Lal-Chr13 134498 136846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0021 35 782 Subtilisin-like Serine Gene Family AT5G51750 71.028 0.0 1124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0021 - - lang:109354646 1412.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0021 13 134498 136846 Lal13g0021 13 134498 136846 ECH
Lal13g0021 13 134498 136846 Lal24g0027 24 188255 190597 LSH
Lal1g0796 1 5420440 5422767 Lal13g0021 13 134498 136846 PCT
Lal13g0021 13 134498 136846 Lal1g0796 1 5420440 5422767 PCT