Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0014 ATGCAGCAGCAGCAGCAGCAGCAGCTTCTTGTTCACTCAGATGAAATGGAACCCCAATCTCAAGAATTTGATGACAAATCTGAACAACAGAAAGCCAAAATAGATGCTCTGGAATATAAAATTGAGGAAGAAGGCGTGACTCTGGACGTATCAGGGAAGAGCTTCGAGTTCCCGTCATCGGAAAATAAAAAAGATTCGATGGTGGAGAGTTTGTATCTATACAAGAATGTTTATAGTTTGATACCGAAGTCGGTGGGTGAACACGTTCGGTTGAAAACCCTTAAGTTCTTCGGGAACGAGATTAATTTATTTGCACCTGGTTTTGGGGACTTGAATGGTTTGGAATGCTTGCAGATGAAGATTTCTCCTCCTGGGATTGGTGGCTTACCATTACATAATATGAAGGGTTTGAAAGAGCTTCAGCTTTCCAAAACGCCTCCAAGGCCTTCTGCTTTTCCTATTTTGACTCACATTGCTACACTCAAAAGCTTGACCAAGCTTTCTATTTGTCACTTTTCTATAAGATTTCTTCCTCCCGAAATTGGATGCTTAAAGAATCTGGAATATCTGGATCTTTCATTCAATAAGATTAAGAGATTGCCCGAAGAGGTGACTTTCTTGAGTGGGTTGATATCCATGAAAGTTGCCAACAATAAATTGGTGGAACTACCATCAGCAATGGCATCTTTATCCATGTTGGAGAGTTTGGACCTGTCAAGTAATAGGTTGACTTCGTTGGGATCCATTGAACTTTGCTCAATGCATAGACTGCGGAATTTAAATCTTCAGTACAATAAGCTGCTAAGCGTCTTTCAAATACCTTCATGGATATGCTGTAACATGGAAGGAAATGATGGAGGTGGATGCAATGATGATTCTAGCTGTTATGTTGAAATGGATGTCTATGAAAATAGTTCACAGGAAAATGATATTCATGGCCCTCATAGCACATCATCTTGTTTATTGACTAGCTCCTCATCTAGCAGTAGATGTTTTGCAGCCCGGAAGTCAGGTAAGCGGTGGAAACGCCAGTATTACTTACAGCAGAAAGCTCGTCAAGCATGCTTGAACAACAGCAGGAAGTGGAAAGGTGTAGATCATGATCAGTTGTTGAGCAAAAAGATTCACAGAATCTCTGAACCAGAAAATGTAGACAGTCTTGCTTCTGAAAGTTGTAGAGAAACTGTATCAGACAAAGCAAACCTGGATGAAAATAAAAAAATAATATTTTCTGAAGAACCGGTGAACAACAATTTAATTGATGCTGTCAATGATGATGAAGTAATTATTGAAAAGCAGTTTTGTGCAGAAAGTTGCTGCACCGCTGAAAGTAAAAATGAAAATGATACATCGTTATGCTCCTTAGAGAATATGCCCACTGAACTGGATGAAGCATCCTGTTCAGAAATTCAGAAGTGTATTTCTAAATCAAAGAGGCATTCAGATCGAGATATTGATAATCCCAAACCGTGCAAATCTAGAAAACCGATTGACAATAGCTCATTATTGTCTAGCCAGTACAGTAAGATCTCATTTTGTGGCATTGAGGACCATCTATCAGACGGCTTTTATGATGCAGGACGTGATCGGCCCTTTATGCCACTTGAGAATTATGAGCGTAAACAGTGTTTTGATTCTCGCGAAGTTATTCTGTTGGACAGAAAAAAAGATGAAGAGTTGGATGCTGTATTACTCTCTGCTCGGGCATTGGTATATAATTTGAAGAACCAGGCTGCAGTTTATAACTTGCAGGCAGCATCACTGCTTGCACTTTTTGTATCAGATCATTTTGGTGGCAGTGATAGAGGTGCTATTGTCCAAAGGACAAGGAAAGCTGTTTCTGGTTCAAACTATAATAAGCCTTTTGTCTGCACATGCTCAGCTGGGAGCAGCACTGATATAAGTGCTTCTGACAAACCAGTTGTAAACACCACGGAAGATATCACTCTTCCCATGATTTCTGAAAAATCTCTTCATTCTATAAAGAAAAGGCGAAGTTCAATCGTAGTTCCAATTGGGTCTGTGCAGTTTGGTGTATGTAGACATAGAGCTTTGCTTTTGAAGTATTTATGTGATCACATGGAGCCGCCAGTACCTTGTGAGCTTGTTAGGGGTTACCTGGATTTTTCGCCACATGCCTGGAACATCATTGTGATTAAGAGAGATGGTATATGGGTTCGAATGCTAGTTGATGCATGTCGGCCTCATGATATAAGAGAAGAGAAAGATCCTGAATACTTTTGCAGGTACATACCTCTTAGTCGAACAGAAATCTCGCTTTCATGTAGAGGAACTCCTGGACCTGATCAATCCTTTCCATCTCTCTCTTCTTGTAATGAGCTTGAGAAAAAAACTTCTACTACTTTAGTTCGGTGCAAACTTGGATCAATTGAGGCTGCAGCAAAGGTGCGCACTTTGGAAGTGCAGGCGAGTTCATCTGAAAAAATTAAAAACTTCGAATATAATTGTTTGGGAGAAGTTAGAATTCTAGGTGCTTTAAAACATCCCTGCATAGTGGAAATGTATGGACACCAAATATCATGCCAATGGACTCTCTCATCTGATGGTAATCCTGAGCATCATGTATTAAGATCTTCAATTTTTATGGAGTATGTGGAAGGGGGGTCCTTAAAAAACTATCTAAATATGCTATCAGAAGCTGGTGAAAAGCATGTCCCTTTGGACTTGGCTTTTTGTATTGCCAAAGATGTCGCATGCGCTTTGTTGGAACTGCATTCAAAGCACATAATACACCGTGACATAAAAAGTGAAAACATTCTTTTTGATTTGGATAAGAGAGAGGATGGAATTCCCACTGTTAAGCTCTGTGATTTCGATAGTGCGGTGCCACTAAGATCACCTTTGCATGCATGCTGCATTGCTCATGTGGGAACACCTCCTCCGTGTGTATGTGTTGGAACACCTCGGTGGATGGCTCCAGAGGTTATGCGGACGATGCATGAAAAAAACACTTATGGATTGGAAGCTGATATTTGGTCATTTGGATGTTTACTTTTGGAGATGCTCACTCTACAAATTCCATATTCTGGAGTCTCTGATTCAGATGTCCATGACAGTCTGCAGATTGGTAAACGACCAAAATTAACTGCTGAGCTGGAAGCATTGTGTTCAGTTAATGAACCTACTTTGATTCAATCTGGTAAAGTGGAAGAAACAGATGCTGAGGTAGACATGCTGAAGTTCCTTGTTAATTTGTTTGGTAAGTGTGTCGAAGAAGATCCAACAGAACGTCCTACAGCTCAAGAAATCCATGAAATGCTGCTTAAACACAGCCCCCCTTCAAGAACAAGATGTTAA 3318 0.403 MQQQQQQQLLVHSDEMEPQSQEFDDKSEQQKAKIDALEYKIEEEGVTLDVSGKSFEFPSSENKKDSMVESLYLYKNVYSLIPKSVGEHVRLKTLKFFGNEINLFAPGFGDLNGLECLQMKISPPGIGGLPLHNMKGLKELQLSKTPPRPSAFPILTHIATLKSLTKLSICHFSIRFLPPEIGCLKNLEYLDLSFNKIKRLPEEVTFLSGLISMKVANNKLVELPSAMASLSMLESLDLSSNRLTSLGSIELCSMHRLRNLNLQYNKLLSVFQIPSWICCNMEGNDGGGCNDDSSCYVEMDVYENSSQENDIHGPHSTSSCLLTSSSSSSRCFAARKSGKRWKRQYYLQQKARQACLNNSRKWKGVDHDQLLSKKIHRISEPENVDSLASESCRETVSDKANLDENKKIIFSEEPVNNNLIDAVNDDEVIIEKQFCAESCCTAESKNENDTSLCSLENMPTELDEASCSEIQKCISKSKRHSDRDIDNPKPCKSRKPIDNSSLLSSQYSKISFCGIEDHLSDGFYDAGRDRPFMPLENYERKQCFDSREVILLDRKKDEELDAVLLSARALVYNLKNQAAVYNLQAASLLALFVSDHFGGSDRGAIVQRTRKAVSGSNYNKPFVCTCSAGSSTDISASDKPVVNTTEDITLPMISEKSLHSIKKRRSSIVVPIGSVQFGVCRHRALLLKYLCDHMEPPVPCELVRGYLDFSPHAWNIIVIKRDGIWVRMLVDACRPHDIREEKDPEYFCRYIPLSRTEISLSCRGTPGPDQSFPSLSSCNELEKKTSTTLVRCKLGSIEAAAKVRTLEVQASSSEKIKNFEYNCLGEVRILGALKHPCIVEMYGHQISCQWTLSSDGNPEHHVLRSSIFMEYVEGGSLKNYLNMLSEAGEKHVPLDLAFCIAKDVACALLELHSKHIIHRDIKSENILFDLDKREDGIPTVKLCDFDSAVPLRSPLHACCIAHVGTPPPCVCVGTPRWMAPEVMRTMHEKNTYGLEADIWSFGCLLLEMLTLQIPYSGVSDSDVHDSLQIGKRPKLTAELEALCSVNEPTLIQSGKVEETDAEVDMLKFLVNLFGKCVEEDPTERPTAQEIHEMLLKHSPPSRTRC 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0014 1105 PANTHER BNAC08G43810D PROTEIN 69 1097 - -
Lal13g0014 1105 SMART LRR_sd22_2 230 251 - -
Lal13g0014 1105 SMART LRR_sd22_2 184 206 - -
Lal13g0014 1105 ProSiteProfiles Leucine-rich repeat profile. 186 207 IPR001611 GO:0005515
Lal13g0014 1105 Gene3D Ribonuclease Inhibitor 43 285 IPR032675 -
Lal13g0014 1105 Pfam Protein kinase domain 813 1092 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0014 1105 MobiDBLite consensus disorder prediction 1 30 - -
Lal13g0014 1105 MobiDBLite consensus disorder prediction 1 15 - -
Lal13g0014 1105 MobiDBLite consensus disorder prediction 478 497 - -
Lal13g0014 1105 Pfam Ethylene-responsive protein kinase Le-CTR1 653 721 - -
Lal13g0014 1105 SUPERFAMILY RNI-like 65 279 - -
Lal13g0014 1105 Gene3D Transferase(Phosphotransferase) domain 1 774 1102 - -
Lal13g0014 1105 PRINTS Leucine-rich repeat signature 187 200 - -
Lal13g0014 1105 PRINTS Leucine-rich repeat signature 230 243 - -
Lal13g0014 1105 SMART LRR_bac_2 207 226 - -
Lal13g0014 1105 SMART LRR_bac_2 184 203 - -
Lal13g0014 1105 SMART LRR_bac_2 230 249 - -
Lal13g0014 1105 SMART LRR_typ_2 230 253 IPR003591 -
Lal13g0014 1105 SMART LRR_typ_2 254 280 IPR003591 -
Lal13g0014 1105 SMART LRR_typ_2 161 183 IPR003591 -
Lal13g0014 1105 SMART LRR_typ_2 184 207 IPR003591 -
Lal13g0014 1105 SMART serkin_6 779 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0014 1105 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 69 1097 - -
Lal13g0014 1105 Pfam Leucine rich repeat 210 267 IPR001611 GO:0005515
Lal13g0014 1105 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Lal13g0014 1105 SUPERFAMILY Protein kinase-like (PK-like) 787 1095 IPR011009 -
Lal13g0014 1105 MobiDBLite consensus disorder prediction 478 493 - -
Lal13g0014 1105 ProSiteProfiles Leucine-rich repeat profile. 232 253 IPR001611 GO:0005515
Lal13g0014 1105 ProSiteProfiles Protein kinase domain profile. 783 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0014 Lal-Chr13 90398 98917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0014 795 1090 MAP Kinase Kinase Kinase AT4G08500 30.405 7.66e-21 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Lal13g0014 Pkinase 5.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0014 - - gmx:100811118 1620.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0014 13 90398 98917 Lal13g0014 13 90398 98917 ECH