Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0009 ATGGGGAAAACAGGCAAATGGTTCAGAAATTTGTTGAAAAGAAAGAAAGAGAAGAAGGAAAAAGATGAAAGTGCAACTAACCTGAATTGTTCTTCAAATGGAACAGAAAATCCAACCATTCCAATTTCAAAAACACCAAAGGAGAAAGGGAGACAGAGTATAAGGAGATCACCAACACCAAGAGGTTCCTTAACAAATTTGGTAGAATCATCACAGAATCAGCATACCATGGCACATGCTTCTGCTGCTGCTGTGATCCGCTTCGGTTCCAGTACCAATGCTACAACAATTCAAGAGGCTGCTGCCATTAAAATCCAATCCATCTTTCGCTCTCACTTGGCAAGAAAAGCATTGTGTGCTCTTAGGGGATTAGTTAAGTTGCAAGCACTAGTAAAGGGTCACTTGGTGAGAAAACAAGCCAAGGCAACACTAAGATCCATGCAGGCTTTGGTGACAGCACAAGCCAGAGCTCGTGCTCAACGGATCCGAAATGTATTAGAAAGAAAACAAGATCAAAAGCAATCAACCTATACAAATACCTCAGAAGATGATTTATTCAGGCATATGCATGATGAAATGGACAGAAGCTTGGAAGACAAAATCAAGATTGTGGAAATGGATGTTTGTGAATCAAAAGGTAACTCTAGAAGCAGTATCACCAATGCATATCATCAGGATCAATATGAGCATAGATTTTCCACATATTATTCAAACAATAGTCCACACTCAAAGGAAGAGAACTACAAGGTATCACCAGCTCCTTCAGATTTAACAGGACTGAGTGCAATAGCCTGCAGTGGCCACTTCGAGGAGTGTTTCAGCACAGCACAAAGCAGCCCTCAAGGCCAATACTATGCTGTGTCTAAAGATAATGAAGATTCAATGCACCCTTTTGCTTTTCCTAAGCCACCCTATACAGAATCTATCATGTCCTATGACCACCCTGTGTTCCCAAAATACATGGCTAATACTGAATCCTCAAGGGCCAAAGTCAGATCACAAAGTGCACCAAAACAAAGGCCAGATTCATTTGAGAGGCAACTAAGCCGGCGAAGATTTTCATTGGAAGGAAGAAATGTGCCTAGGCCAGTGAGGATGCAGAGGTCATCTTCACATGTGAGTGTCACTGCACACAATTATAAGGATCCATGCTCAATCAAGCTTAACAAATCAACAGTTTCACTGAAAGATAGTGAGTGTGGCTCTACAAGTACAGTGATCACAACAAACACTAATCACTGCACATCTTTTGTTGCATATGATAGTCATGGAGTTAGGTACTGA 1284 0.412 MGKTGKWFRNLLKRKKEKKEKDESATNLNCSSNGTENPTIPISKTPKEKGRQSIRRSPTPRGSLTNLVESSQNQHTMAHASAAAVIRFGSSTNATTIQEAAAIKIQSIFRSHLARKALCALRGLVKLQALVKGHLVRKQAKATLRSMQALVTAQARARAQRIRNVLERKQDQKQSTYTNTSEDDLFRHMHDEMDRSLEDKIKIVEMDVCESKGNSRSSITNAYHQDQYEHRFSTYYSNNSPHSKEENYKVSPAPSDLTGLSAIACSGHFEECFSTAQSSPQGQYYAVSKDNEDSMHPFAFPKPPYTESIMSYDHPVFPKYMANTESSRAKVRSQSAPKQRPDSFERQLSRRRFSLEGRNVPRPVRMQRSSSHVSVTAHNYKDPCSIKLNKSTVSLKDSECGSTSTVITTNTNHCTSFVAYDSHGVRY 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0009 427 MobiDBLite consensus disorder prediction 325 358 - -
Lal13g0009 427 SMART iq_5 120 141 IPR000048 GO:0005515
Lal13g0009 427 SMART iq_5 97 119 IPR000048 GO:0005515
Lal13g0009 427 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 403 - -
Lal13g0009 427 Pfam IQ calmodulin-binding motif 125 141 IPR000048 GO:0005515
Lal13g0009 427 Pfam IQ calmodulin-binding motif 100 118 IPR000048 GO:0005515
Lal13g0009 427 MobiDBLite consensus disorder prediction 343 358 - -
Lal13g0009 427 Pfam Protein of unknown function (DUF4005) 288 359 IPR025064 -
Lal13g0009 427 MobiDBLite consensus disorder prediction 1 65 - -
Lal13g0009 427 MobiDBLite consensus disorder prediction 326 342 - -
Lal13g0009 427 Gene3D - 97 149 - -
Lal13g0009 427 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Lal13g0009 427 MobiDBLite consensus disorder prediction 26 42 - -
Lal13g0009 427 Coils Coil 152 172 - -
Lal13g0009 427 PANTHER IQ-DOMAIN 5-RELATED 1 403 - -
Lal13g0009 427 ProSiteProfiles IQ motif profile. 122 149 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0009 Lal-Chr13 70018 79553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0009 1 413 IQD Protein Family AT4G14750 42.857 9.46e-80 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0009 - - gmx:100817667 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0009 13 70018 79553 Lal13g0009 13 70018 79553 ECH