Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1574 ATGCATATACAGAAACAGAGTCTGCAGCACTTTTGGCTCCAACAGATATTGGATATTCGAAATACCGAAGCATTTAAGAACAACAAACAATTGCCTCTATCTCGAATTAAAAGGATTGTCAAGGCAGACAAGGATGTGAAGATGGTTAGTGCAGAAGTTCCATTATTTATGGCAAAAGCATGTGAGATTTTCATTCTGGAGCTAACCCTTCGATCGTGGATGCTTACTGAAGAGAACGAGAGGTGCACCCTTCAGAATCATGACATTGCTAAAGCTATTCAGAAAAAACATGTCCTTCATTTCCTCACCAATCTTGTTCATTCTGATCAGCTTCAACTTTACGAGCACCAGGGAATCCATGATGGAAAAGAAGGAAACCAAGCCTATTTGTCTCATGTTGCTACTTCTATGGAAAATACTCAAACCTGTGTGGCTGAAATGGTGACAACAAACAATCAAATTCCTCAACCTCAGATGATGTTGATGCATTTTGATCCATTTACTTACAAATTTTTTGAACTTGAGCAGGAAACCAAGTCTGGAAAAGAAGAAAACCTAGCTTCCTTATTTGATGCTGCTGGTTCTAAAGAAAATACTATGACAAATATGGCTATGAGTACTTCTACTTCTATGGAAGTTAAAATGGAAAATATGGGTGAAATGGAGGCACCAAACCAAGAACTTCCACAACCTCGGATGATGCTGTCTGATTTTGATCCTTTCCAGTACAATTATTTTCAGCCAGAG 747 0.3855 MHIQKQSLQHFWLQQILDIRNTEAFKNNKQLPLSRIKRIVKADKDVKMVSAEVPLFMAKACEIFILELTLRSWMLTEENERCTLQNHDIAKAIQKKHVLHFLTNLVHSDQLQLYEHQGIHDGKEGNQAYLSHVATSMENTQTCVAEMVTTNNQIPQPQMMLMHFDPFTYKFFELEQETKSGKEENLASLFDAAGSKENTMTNMAMSTSTSMEVKMENMGEMEAPNQELPQPRMMLSDFDPFQYNYFQPE 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1574 249 Gene3D Histone, subunit A 1 107 IPR009072 GO:0046982
Lal12g1574 249 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 4 192 IPR027170 GO:0003700|GO:0006355|GO:0016602
Lal12g1574 249 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 4 192 - -
Lal12g1574 249 SUPERFAMILY Histone-fold 27 110 IPR009072 GO:0046982
Lal12g1574 249 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 93 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1574 Lal-Chr12 18955543 18957084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1574 8 122 CCAAT-HAP5 Transcription Factor Family AT1G56170 53.913 1.05e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lal12g1574 CBFD_NFYB_HMF 1.8e-13 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1574 K08066 - lang:109346916 202.601